Table 1.
Transcriptomic (microarray) results for genes known to be involved in photosynthesis
| Photosynthesis | Accession number | Gene | Protein function | Fold change 3200 Gy | Fold change 5000 Gy |
|---|---|---|---|---|---|
| PSII | ARTHROv5_10312 | psbA1 | Photosystem II reaction center D1 protein Q(B) | NS | NS |
| ARTHROv5_10319 | psbA2 | Photosystem II reaction center D1 protein Q(B) | NS | NS | |
| ARTHROv5_40241 | psbA3 | Photosystem II reaction center D1 protein Q(B) | 0.31 | 0.39 | |
| ARTHROv5_60197 | psbA4 | Photosystem II reaction center D1 protein Q(B) | NS | NS | |
| ARTHROv5_10245 | psbB | Photosystem II P680 chlorophyll A apoprotein (CP47 protein) | 0.57 | 0.27 | |
| ARTHROv5_11994 | psbC | Photosystem II CP43 protein | NS | 0.58 | |
| ARTHROv5_11993 | psbD1 | Photosystem II reaction center D2 protein Q(A) | NS | NS | |
| ARTHROv5_60553 | psbE | Photosystem II reaction center subunit V (Cytochrome b559 subunit alpha) | NS | 0.53 | |
| ARTHROv5_60554 | psbF | Photosystem II reaction center subunit VI (Cytochrome b559, subunit beta) | 0.58 | 0.35 | |
| ARTHROv5_60555 | psbL | Photosystem II reaction center protein L | 0.53 | 0.32 | |
| ARTHROv5_40752 | psbH | Photosystem II reaction center protein H (PSII-H) | NS | 0.62 | |
| ARTHROv5_40753 | psbN | Photosystem II reaction center protein N (PSII-N) | NS | NS | |
| ARTHROv5_30303 | psbI | Photosystem II reaction center protein I | 1.63 | 4.40 | |
| ARTHROv5_11112 | psb28 | Photosystem II reaction center protein W (13 kDa protein) | NS | NS | |
| ARTHROv5_61163 | psb28 | Photosystem II reaction center psb28-like protein | NS | 1.95 | |
| ARTHROv5_20093 | psb27 | Photosystem II 11 kD protein | NS | 0.51 | |
| ARTHROv5_40153 | psbO | Photosystem II Mn-stabilizing polypeptide precursor (MSP) | NS | 0.23 | |
| ARTHROv5_10852 | psbP | Photosystem II oxygen-evolving complex 23K protein | NS | NS | |
| ARTHROv5_40969 | psbU | Photosystem II extrinsic protein precursor (12 kDa protein) | NS | NS | |
| ARTHROv5_50093 | Putative cytochrome c-550-like protein precursor | 0.31 | 0.38 | ||
| ARTHROv5_50094 | psbV | Cytochrome c-550 precursor | 0.30 | 0.28 | |
| ARTHROv5_61031 | psbY | Photosystem II protein Y | NS | 0.46 | |
| ARTHROv5_11396 | psbZ | Photosystem II reaction center protein Z (PSII-Z) | NS | NS | |
| ARTHROv5_60878 | ftsH | (ATP-dependent zinc-metallo protease) | 1.27 | 2.77 | |
| ARTHROv5_61180 | isiA | Iron stress-induced chlorophyll-binding protein (CP43′) | 4.98 | NS | |
| Plastoquinone (PQ) | ARTHROv5_10689 | ndhA | NAD(P)H-quinone oxidoreductase, membrane subunit H | 0.71 | 0.29 |
| ARTHROv5_10690 | ndhI | NAD(P)H-quinone oxidoreductase, subunit I | NS | 0.19 | |
| ARTHROv5_10691 | ndhG | NAD(P)H-quinone oxidoreductase, chain 6 | NS | 0.42 | |
| ARTHROv5_10692 | conserved protein of unknown function | 0.37 | 0.30 | ||
| ARTHROv5_10693 | ndhE | NAD(P)H-quinone oxidoreductase, membrane subunit K | NS | 0.31 | |
| ARTHROv5_40057 | ndhH | NAD(P)H-quinone oxidoreductase, chain H | 0.57 | 0.45 | |
| ARTHROv5_40540 | ndhD1 | NAD(P)H-quinone oxidoreductase chain 4 | NS | 0.53 | |
| ARTHROv5_40541 | ndhF1 | NAD(P)H-quinone oxidoreductase, chain 5 | NS | 0.42 | |
| ARTHROv5_40542 | ndhD2 | NAD(P)H-quinone oxidoreductase, chain 4 | NS | 0.35 | |
| ARTHROv5_60388 | ndhF2 | NAD(P)H-quinone oxidoreductase, chain 5 | NS | 0.38 | |
| ARTHROv5_60389 | ndhD3 | NAD(P)H-quinone oxidoreductase, chain 4 | NS | 0.35 | |
| ARTHROv5_60547 | ndhJ | NAD(P)H-quinone oxidoreductase, subunit J | NS | 0.41 | |
| ARTHROv5_60548 | ndhK | NAD(P)H-quinone oxidoreductase, subunit K | NS | 0.50 | |
| ARTHROv5_60549 | ndhC | NAD(P)H-quinone oxidoreductase, chain A | NS | 0.49 | |
| ARTHROv5_60715 | ndhD4 | NAD(P)H-quinone oxidoreductase, chain 4 | 0.53 | 0.17 | |
| ARTHROv5_60716 | ndhF | NAD(P)H-quinone oxidoreductase, subunit F | NS | 0.21 | |
| Cytochrome b6f | ARTHROv5_40397 | cyoE | Protoheme IX farnesyltransferase (heme O synthase) | NS | 0.32 |
| ARTHROv5_40398 | Cytochrome oxidase assembly protein | NS | 0.29 | ||
| ARTHROv5_40399 | coxB | Cytochrome c oxidase subunit II | NS | 0.54 | |
| ARTHROv5_40400 | coxA | Cytochrome c oxidase subunit I | NS | 0.41 | |
| ARTHROv5_40401 | coxC | Cytochrome c oxidase subunit III | NS | 0.32 | |
| ARTHROv5_61103 | cydB | Cytochrome bd ubiquinol oxidase, subunit II | NS | 0.47 | |
| ARTHROv5_60566 | ccsB | Cytochrome c biogenesis protein | NS | NS | |
| ARTHROv5_60567 | Cytochrome c biogenesis protein transmembrane region | NS | NS | ||
| ARTHROv5_60740 | ccsA | Cytochrome c biogenesis protein | NS | 0.45 | |
| ARTHROv5_50134 | Cytochrome c, monohaem | NS | 0.46 | ||
| ARTHROv5_40277 | petJ | Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) | 0.35 | 0.33 | |
| ARTHROv5_40850 | petA | Cytochrome f | NS | NS | |
| Plastocyanin (PC) | ARTHROv5_40851 | petC | Cytochrome b6-f complex iron-sulfur subunit 1 plastocyanin oxidoreductase | NS | NS |
| PSI | ARTHROv5_10984 | psaA | Photosystem I P700 chlorophyll a apoprotein A1 | 0.56 | 0.27 |
| ARTHROv5_10985 | psaB | Photosystem I P700 chlorophyll a apoprotein A2 | 0.59 | 0.28 | |
| ARTHROv5_10235 | psaC | Photosystem I reaction center subunit VII, iron-sulfur center | 0.54 | 0.37 | |
| ARTHROv5_30080 | psaD | Photosystem I reaction center subunit II (16 kDa polypeptide) | NS | NS | |
| ARTHROv5_30570 | psaE | Photosystem I reaction center subunit IV | 2.12 | 2.21 | |
| ARTHROv5_30656 | psaJ | Photosystem I reaction center subunit IX | 0.29 | 0.14 | |
| ARTHROv5_30657 | psaF | Photosystem I reaction center subunit III precursor | 0.35 | 0.15 | |
| ARTHROv5_50157 | psaL | Photosystem I reaction center subunit V | 0.50 | 0.24 | |
| ARTHROv5_40172 | psaX | Photosystem I reaction center subunit | 0.31 | 0.27 | |
| ARTHROv5_11973 | btpA | Photosystem I biogenesis protein | NS | 0.36 | |
| ARTHROv5_11992 | ycf4 | Photosystem I assembly protein | NS | NS | |
| ARTHROv5_41247 | ycf3 | Photosystem I assembly protein | NS | NS | |
| Ferrodoxin (FD) | ARTHROv5_60106 | petF1 | Ferredoxin (2Fe-2S) | 0.59 | 0.29 |
| ARTHROv5_10430 | petF2 | Ferredoxin-2 | 0.27 | 0.18 | |
| FNR | ARTHROv5_41386 | petH | Ferredoxin:NADPH reductase | NS | 0.57 |
| ARTHROv5_50074 | iscA1 | FeS cluster assembly protein | 0.51 | 0.58 | |
| ARTHROv5_60637 | iscA2 | FeS cluster assembly protein, IscA-like | NS | NS | |
| ARTHROv5_11765 | sufR | Iron-sulfur cluster biosynthesis transcriptional regulator | NS | 2.12 | |
| ATP synthesis | ARTHROv5_60530 | atpI | ATP synthase protein I | 0.33 | 0.18 |
| ARTHROv5_60531 | atpB | ATP synthase A chain (ATPase protein 6) | 0.35 | 0.17 | |
| ARTHROv5_60532 | atpE | ATP synthase C chain, membrane-bound, F0 sector | 0.24 | 0.18 | |
| ARTHROv5_60533 | atpG2 | ATP synthase B chain (Subunit II) | 0.07 | 0.14 | |
| ARTHROv5_60534 | atpF | ATP synthase B chain (Subunit I) | 0.07 | 0.17 | |
| ARTHROv5_60535 | atpH | ATP synthase D chain; ATP synthase F1 | 0.12 | 0.15 | |
| ARTHROv5_60536 | atpA | ATP synthase, alpha subunit | 0.23 | 0.17 | |
| ARTHROv5_60537 | atpG1 | ATP synthase, gamma subunit | 0.33 | 0.33 | |
| ARTHROv5_12000 | atpC | ATP synthase epsilon chain | NS | NS | |
| ARTHROv5_12001 | atpD | ATP synthase, beta subunit | NS | NS |
The fold change (FC) values listed are values for which P < 0.05, and are only considered biologically significant if FC > 2 or <0.5. “NS” stands for statistically not significant differentially expressed (P ≥ 0.05).