Table 3.

CRP binding sites in front of potential lipB/A operons from a variety of species amongst γ-proteobacteria

Organisms	Gene	Loci	CRP site	Position1	Score
Enterobacter sp. 638	ybeD	Ent638_1166	AAGTGTGATTTCCATCCCCATA	−90	4.4
Escherichia coli MG1655	ybeD	b0631	AAGTGTAATTTCCGTCCCCATA	−94	3.6
Cistrobacter koseri	ybeD	CKO_02527	AAGTGTGATTTCCATCCCCATA	−91	4.4
Klebsiella pneumonia	ybeD	KPN_00663	AAGTGTGATTTCCATCCCCATA	−97	4.4
Salmonella typhimurium LT2	ybeD	STM0636	AGTTGTTATTTTTTTTACGTAA AAGTGTGATTTTCGTCCCCATA	−35 −93	3.9 4.2
Yersinia pestis	ybeD	y1174	TATTGTGATTAATCTTATATTG	−146	4.2
Shewanella baltica	lipB	Sba_3281	AAATGTGATCTGTCTTACATTT	−74	5.2
S. halifaxensis	lipB	ShaI_3240	AAATGTGATCCGTATTACATTT	−76	5.2
S. loihica	lipB	Shew_2941	AAATGTGATCTACCTTACATTT	−70	5.3
S. oneidensis	lipB	SO1162	AAGTGTGATCTATCTTACATTT	−68	5.1
S. pealeana	lipB	Spea_3155	AAATGTGATCCGTATTACATTT	−76	5.2
S. piezotolerans	lipB	swp_3928	AAATGTGATCTGTCTTACATTT	−69	5.2
S. putrefaciens	lipB	Sputcn32_2875	AAATGTGATCTATCTTACATTT	−69	5.3
S. sediminis	lipB	Ssed_3491	AAATGTGATCTAGCTTACATTT	−75	5.3
S. woodyi	lipB	swoo_3714	AAGTGTGATCTAGCTTACAATT	−74	5.1
S. sp ANA-3	lipB	Shewanan3_0989	AAATGTGATCTGTCTTACATTT	−74	5.2
S. sp MR-4	lipB	Shewmr4_0985	AAATGTGATCTGTCTTACATTT	−74	5.2
S. sp MR-7	lipB	Shewmr7_1050	AAATGTGATCTGTCTTACATTT	−74	5.2
S. sp W3-18-1	lipB	Sputw3181_1028	AAATGTGATCTATCTTACATTT	−75	5.3

CRP, cAMP-receptor protein.

¹The position is relative to the translation initiation site. All the information is sampled from the RegPrecise database (http://regprecise.lbl.gov/RegPrecise/search.jsp).