Figure 2. Quartet supernetworks built from 516 individual ML gene trees, showing predominant inter-gene conflicts in genes selected for concatenation.
A qualitatively nearly identical topology (not shown) was recovered using bootstrap majority rule consensus trees as input. Edge weights were calculated in SuperQ v1.1, with the ‘balanced’ linear objective function, and no filter applied. Supernetwork was visualized in SplitsTree v4 using default settings.