Figure S3.

Heatmap Representing Sequence Coverage across the Genome, Related to Figure 2

For each sample, sequence alignments were binned by alignment start position into 600 kb intervals across the human genome, excluding unplaced contigs, extra haplotypes, and the mitochondrial genome. Counts were quantile normalized across all samples before plotting. Chromosomes are indicated on the vertical axis. Sample brain region location (cortex, hippocampus), cell type (glial, neuron) and individual ID are indicated for groups of columns on the horizontal axis. For each individual, single cells are ordered numerically. Note: low and high coverage bins are indicated in yellow and blue, respectively.