TABLE 2.
Nucleotide sequences in the primer regions of PCR targeting the Cryptosporidium chipmunk genotype I and their corresponding sequences in Cryptosporidium ubiquitum
| Species/genotype | Locus | Nucleotide sequence in the primer region |
|||
|---|---|---|---|---|---|
| F1 | R1 | F2 | R2 | ||
| Chipmunk genotype I | gp60 | TTTACCCACACATCTGTAACGTCG | CCTGTGAGAATATTCTGGAAATTA | ATAGGTAATAATTACTCAGTATTTAAT | TACTCTTAAAACGCTTAAACTCTTAA |
| C. ubiquitum | gp60 | TTTACCCACACATCTGTAGCGTCG | CCTGTGAGAATATTCTGGAAATTA | ATAGGTAATAATTAGTCAGTCTTTAAT | TACTTTTTAAAGCGCTTAAACTCTTAA |
| Chipmunk genotype I | Mucin | GTCAGGATCATCTTCAACTAAAAC | GGAACTGATGACATCTCTACA | TTCTAGAGTCGGGTCATCTACA | TCGGGAGATATTCCGTATCTC |
| C. ubiquitum | Mucin | GTCAGGATCATCTTCAACTAAAAC | AGATTTAATGAGTTCTTTACA | AGGAACAACAAGGCCATCAGGAACA | TCGGGTTATTGCTTTGTCTCT |