Table 1.
Summary statistics of the RAD tag sequencing via illumina (DH962, Jimian5)
| Feature | DH962 | Jimian5 |
|---|---|---|
| Illumina reads (million) after sequence editing | 62.46 | 61.27 |
| Sequences bases (Gb) after sequence editing | 5.15 | 5.18 |
| Number of contigs | 178,157 (55.27 Mb) | 181,422 (57.06 Mb) |
| Average contig length (bp) | 310 | 314 |
| Common contigs | 105,264 (38.14 Mb) | |
| Contig number of Gh-D-J data set |
251,816 (85.76 Mb) | |
| Number of SSR primer pairs | 1,323 | |
| Number of InDel primer pairs | 3,838 | |
| Number of SNP primer pairs | 9,366 | |
| Number of sequences with markers | 14,433 | |