Table 2. Summary of BLASTx search results of D. muscipula transcriptome.
Database | D. muscipula hits | Unique protein hits | % of total unique proteins |
---|---|---|---|
nr | 42,656 | 17,047 | |
Refseq/Ensembl | |||
Arabidopsis thaliana | 41,422 (51.3%) | 13,469 | 38.1% (13,469/35,378) |
Brachypodium distachyon | 39,962 (49.4%) | 11,795 | 48.8% (11,795/24,689) |
Oryza sativa | 39,353 (48.7%) | 11,506 | 40.1% (11,506/28,705) |
Physcomitrella patens | 34,084 (42.2%) | 9,390 | 26.1% (9,390/35,936) |
Ricinus communis | 41,839 (51.7%) | 12,279 | 39.1% (12,279/31,344) |
Vitis vinifera | 43,634 (53.9%) | 12,837 | 53.8% (12,837/23,877) |
Zea mays | 35,229 (43.6%) | 10,194 | 45.1% (10,194/22,588) |
Solanum lycopersicum | 42,489 (52.6%) | 13,152 | 59.8% (13,152/26,408) |
From a total of 80,816 contigs, 42,656 have a RefSeq hit, corresponding to 17,047 unique protein entries. Total number and unique hits from a BLASTx against RefSeq entries for 8 other plant species is also presented. The percent of total unique proteins is based on the current number of RefSeq entries for the individual species.