Table 7. Some differential expressed miRNAs (|log2 (fold change)|> 3) and their targets.
Index | miR_name | Fold (R/P) | log2 (R/P) | R-NE | P-NE | Number of Targets |
---|---|---|---|---|---|---|
1 | hsa-miR-449a | 113.18 | 6.82 | 1842.72 | 16.28 | 1030 |
2 | bta-miR-183_L-1 | 44.12 | 5.46 | 153.92 | 3.49 | 712 |
3 | PC-5p-20799_45 | 32.53 | 5.02 | 75.67 | 2.33 | 557 |
4 | hsa-miR-184 | 31.05 | 4.96 | 72.23 | 2.33 | 273 |
5 | PC-3p-25064_36 | 31.05 | 4.96 | 36.11 | 1.16 | 829 |
6 | hsa-miR-187-3p_R+1 | 26.48 | 4.73 | 338.79 | 12.79 | 352 |
7 | bta-miR-182 | 14.55 | 3.86 | 3518.63 | 241.89 | 756 |
8 | oan-miR-429-3p_R+2 | 14.3 | 3.84 | 49.87 | 3.49 | 679 |
9 | PC-5p-5933_158 | 11.77 | 3.56 | 164.24 | 13.96 | 427 |
10 | hsa-miR-200a-5p | 11.4 | 3.51 | 450.58 | 39.54 | 351 |
11 | PC-3p-36269_24 | 10.35 | 3.37 | 24.08 | 2.33 | 806 |
12 | oar-miR-154b-3p_L-1 | 10.35 | 3.37 | 12.04 | 1.16 | 444 |
13 | bta-miR-2284d_L-1R+1_1ss10GA | 10.35 | 3.37 | 6.02 | 0.58 | 515 |
14 | cfa-miR-375 | 9.85 | 3.3 | 882.24 | 89.55 | 220 |
15 | hsa-miR-141-5p_1ss11TC | 9.61 | 3.26 | 11.18 | 1.16 | 988 |
16 | ptr-miR-203_L-1R+1 | 8.24 | 3.04 | 1896.9 | 230.26 | 789 |
17 | PC-5p-91245_7 | 8.13 | 3.02 | 9.46 | 1.16 | 81 |
18 | hsa-miR-628-3p_L+1 | 8.13 | 3.02 | 4.73 | 0.58 | 325 |
19 | oar-miR-133_L+1R-2 | 0.01 | -7.23 | 0.43 | 64.54 | 471 |
20 | hsa-miR-133a-5p | 0.02 | -5.52 | 0.43 | 19.77 | 649 |
21 | hsa-miR-1_1ss1TC | 0.02 | -5.61 | 0.43 | 20.93 | 613 |
22 | oar-miR-133_L+1 | 0.04 | -4.62 | 144.89 | 3558.04 | 956 |
23 | mdo-miR-599-5p_R-2_1ss9TG | 0.04 | -4.61 | 0.86 | 20.93 | 406 |
24 | hsa-miR-767-5p_R-3 | 0.05 | -4.47 | 2.58 | 56.98 | 626 |
25 | bta-miR-490_R+1 | 0.07 | -3.83 | 103.19 | 1465.31 | 813 |
26 | bta-miR-335_R-1 | 0.1 | -3.32 | 143.6 | 1430.42 | 765 |
27 | hsa-miR-490-5p | 0.11 | -3.17 | 10.32 | 93.04 | 649 |
Note: R-NE represented the normalized expression level of miRNAs in the small RNA library generated from receptive endometrium of Xinong Saanen dairy goats. P-NE represented the normalized expression level of miRNAs in the small RNA library generated from pre-receptive endometrium of Xinong Saanen dairy goats. Fold (R /P) and log2 (R/P) indicated the fold change of the miRNAs between samples. P-Value manifested the significance of miRNAs differential expression between two samples. Number of Targets represented putative target genes for a certain miRNA predicted by two software programs (Target Scan v.50 and Mireap v.3.3a).