Table 1. Numbers of Mg2+ sites included in the benchmark dataset for the four site classes described in the text.
Dataset | Total | Metal atom within 4 Å of Mg2+ | Protein or small molecule in Mg2+ inner sphere | RNA-inner | RNA-outer |
---|---|---|---|---|---|
All data | 15334 | 412 [2.7%] | 268 [1.7%] | 9628 [63%] | 5026 [33%] |
Ribosome | 14682 | 373 [2.5%] | 195 [1.3%] | 9382 [64%] | 4732 [32%] |
Non-ribosome | 652 | 39 [6.0%] | 73 [11%] | 246 [38%] | 294 [45%] |
The percentage of sites in each site class is shown in brackets.