TABLE 1.
Gene regulation | No. of genes (normalized to that for shLacZ-Mock) |
||
---|---|---|---|
shDR1-1-Mock | shLacZ-IAV | shDR1-1-IAV | |
≥2-fold up | 709 | 6,994 | 4,486 |
≤2-fold down | 367 | 3,589 | 1,497 |
≥3-fold up | 272 | 4,885 | 2,896 |
≤3-fold down | 88 | 1,335 | 353 |
≥5-fold up | 108 | 1,884 | 875 |
≤5-fold down | 12 | 251 | 48 |
Microarray analysis was performed on stable DR1 KD and control A549 cells (at 10 dpt), with or without IAV infection at an MOI of 50. At 6 hpi, the total RNA samples were subjected to microarray analysis. Each condition of the microarray data was analyzed by GeneSpring 12 software and normalized to the shLacZ-Mock sample, and the numbers of genes with different fold changes under different conditions were obtained by volcano plot analysis (P ≤ 0.05 by Student's t test).