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. 2015 Jan 14;89(7):3659–3670. doi: 10.1128/JVI.03427-14

TABLE 1.

Primers of selected antiviral and inflammatory genes

Primer Gene Primer
Region Amplicon size (bp)
Orientation Sequence (5′-3′)
1 IL-1β F TGG ACC TTC CAG GAT GAG GAC A 897–1044 148
R GTT CAT CTC GGA GCC TGT AGT G
2 IL-2 F GGA CTT TCT GAG GAG ATG GAT AG 498–581 84
R TGT TGT AAG CAG GAG GTA CAT AG
3 IL-6 F TAC CAC TTC ACA AGT CGG AGG C 169–284 116
R CTG CAA GTG CAT CAT CGT TGT TC
4 IL-12p40 F TTG AAC TGG CGT TGG AAG CAC G 720–851 132
R CCA CCT GTG AGT TCT TCA AAG GC
5 TNF-α F TTG TCT ACT CCC AGG TTC TCT 526–632 107
R GAG GTT GAC TTT CTC CTG GTA TG
6 G-CSF F GCA GGC TCT ATC GGG TAT TTC 1895–2006 112
R CAC CCC TAG GTT TTC CAT CTG
7 MCP-1 F GTC CCT GTC ATG CTT CTG G 92–235 144
R GCT CTC CAG CCT ACT CAT TG
8 IP-10 F ATC ATC CCT GCG AGC CTA TCC T 223–356 134
R GAC CTT TTT TGG CTA AAC GCT TTC
9 CXCL-1(KC) F TCC AGA GCT TGA AGG TGT TGC C 206–315 110
R AAC CAA GGG AGC TTC AGG GTC A
10 MIP-1α F ACC ATG ACA CTC TGC AAC C 141–243 103
R CGA TGA ATT GGC GTG GAA TC
11 RANTES F CCT GCT GCT TTG CCT ACC TCT C 152–276 125
R ACA CAC TTG GCG GTT CCT TCG A
12 IFN-β F GCG GAC TTC AAG ATC CCT ATG 183–322 140
R ACA ATA GTC TCA TTC CAC CCA G
13 IFN-γ F AAA TCC TGC AGA GCC AGA TTA T 299–426 128
R GCT GTT GCT GAA GAA GGT AGT A
14 MX-1 F TGG ACA TTG CTA CCA CAG AGG C 773–887 115
R TTG CCT TCA GCA CCT CTG TCC A