Table 1.
Taxon | Target gene | Primers | Primer sequences | Amplicon length | Reference |
---|---|---|---|---|---|
Vertebrates | Cytochrome b | L14841 | 5′-CCATCCAACATCTCAGCATGATGAAA-3′ | 400 bp | Adapted from [73] |
H15149 | 5′-GCCCCTCAGAATGATATTTGTCCTCA-3′ | ||||
T. evansi Type A | VSG RoTat 1.2 | RoTat1.2-F | 5′-GCGGGGTGTTTAAAGCAATA-3′ | 205 bp | Adapted from [37] |
RoTat1.2-R | 5′-ATTAGTGCTGCGTGTGTTCG-3′ | ||||
T. evansi Type B | minicircle | EVAB-1 | 5′-ACAGTCCGAGAGATAGAG-3′ | 436 bp | Adapted from [34] |
EVAB-2 | 5′-CTGTACTCTACATCTACCTC-3′ | ||||
T. vivax | Proline racemase | TvPRAC-F | 5′ CGCAAGTGGACCGTTCGCCT- 3′ | 239 bp | Adapted from [56] |
TvPRAC-R | 5′ ACGCGGGGCGAACAGAAGTG-3′ | ||||
Diverse Trypanosoma species | ITS-1 | ITS-1 F | 5′-TGTAGGTGAACCTGCAGCTGGATC-3′ | T. vivax 150 bp, T. theileri 350 bp, Trypanozoon 450 bp, T. congolense 650 bp | [44] |
ITS-1 R | 5′-CCAAGTCATCCATCGCGACACGTT- 3′ |
bp: base pairs.