Table 2. Isothermal Titration Calorimetry of Human BRD9 with 9H-Purine Compoundsa.
| ligand | [P] (μM) | [L] (μM) | KD (nM) | ΔHobs (kcal/mol) | N | TΔS (kcal/mol) | ΔG (kcal/mol) | LE |
|---|---|---|---|---|---|---|---|---|
| 2a | 740 | 30 | no binding/weak | |||||
| 2b | 385 | 30 | no binding/weak | |||||
| 3a | 477 | 26 | 8475 ± 237 | –9.11 ± 0.12 | 0.99 ± 0.010 | –2.42 | –6.69 | 0.42 |
| 5b | 392 | 30 | no binding/weak | |||||
| 7a | 385 | 34 | 641 ± 33 | –12.71 ± 0.07 | 1.06 ± 0.004 | –4.55 | –8.16 | 0.45 |
| 7b | 385 | 13.5 | 351 ± 18 | –13.04 ± 0.07 | 0.97 ± 0.004 | –4.52 | –8.52 | 0.45 |
| 7c | 378 | 14 | 297 ± 10 | –12.05 ± 0.04 | 0.98 ± 0.003 | –3.46 | –8.59 | 0.45 |
| 7d | 235 | 10 | 397 ± 19 | –9.63 ± 0.06 | 0.97 ± 0.005 | –1.18 | –8.45 | 0.44 |
| 8a | 381 | 18 | 7874 ± 258 | –8.30 ± 0.15 | 1.06 ± 0.014 | –1.57 | –6.73 | 0.35 |
| 8b | 392 | 30 | no binding/weak | |||||
| 8e | 451 | 32 | 7576 ± 365 | –5.35 ± 0.09 | 1.05 ± 0.013 | 1.40 | –6.75 | 0.36 |
| 9a | 378 | 20 | no binding/weak | |||||
| 11 | 381 | 30 | 278 ± 15 | –10.28 ± 0.04 | 1.03 ± 0.003 | –1.63 | –8.65 | 0.43 |
Titrations were carried out in 50 mM HEPES, pH 7.5 (at 25 °C), 150 mM NaCl, and 15 °C while stirring at 1000 rpm. In both cases the protein was titrated into the ligand solution (reverse titration). Titrations were performed in triplicate. Ligand efficiencies (LE) have also been calculated where ΔG values were available (LE = ΔG/N where N is the number of non-hydrogen atoms).