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. 2015 Mar 28;16(1):62. doi: 10.1186/s13059-015-0614-4

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© Sommer et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Regulatory factors enriched among promoters of microbiota-responsive genes. Transcription factor binding sites were predicted in promoter sequences (1 kb) of microbiota-responsive genes. Lists of microbially responsive genes were also compared with target genes inferred from published ChIP-seq data. Results were merged and only the 50 most significantly enriched regulators considered for each of the four epithelial fractions. TF, transcription factor.