Table 2. Phyre structural predictions for K. pneumoniae hypothetical proteins.
Uniprot ID | Protein | Length (aa) | 1st Hit PDB | Protein Template | Conf | Id | 2nd Hit PDB | Template | Conf | Id |
---|---|---|---|---|---|---|---|---|---|---|
W8VNC5 | OmpU | 381 | 1osm | OmpK36 | 100 | 16 | 3nsg | OmpF | 100 | 15 |
G8VZE7 | Hyp | 313 | 3dkt | Maritamacin | 99.5 | 14 | 2e0z | Virus-like particle | 97.7 | 18 |
G8VZH0 | Hyp | 1007 | 2bcm | DaaE adhesin | 31 | 25 | 2khr | MbtH | 24.3 | 50 |
W8VEP4 | OmpX | 172 | 1qj8 | OmpX | 100 | 82 | 3qra | Ail | 100 | 45 |
W8VLL9 | OmpW | 224 | 2f1t | OmpW | 100 | 84 | 2x27 | OprG | 100 | 49 |
W8VBM4 | YbjP | 171 | 4hzb | Tae3 T6SS immunity | 96.7 | 13 | 2cw9 | Tim44 domain | 28.9 | 16 |
W8VBT5 | YedD | 144 | 4hwm | YedD | 100 | 97 | 1ggl | CRBP, lipocalin | 23.2 | 13 |
W8VPI0 | YfaZ | 181 | 1qj8 | OmpX | 99.8 | 16 | 3qra | Ail | 99.7 | 12 |
W8VA83 | YgaU | 149 | 2l9y | Lectin | 99.7 | 36 | 2djp | SB145-LysM domain | 99.5 | 24 |
W8UYP1 | YohG | 479 | 1wp1 | OprM | 100 | 26 | 3pik | CusC | 100 | 25 |
W8URS1 | YiaF | 250 | 1fc2 | Igg-binding protein | 66.2 | 36 | 1lp1 | Igg-binding, Protein Z | 62.9 | 38 |
W8VJJ2 | VacJ | 285 | 4e71 | Rho-binding protein, Plexin B2 | 37.9 | 47 | 3kuz | Ubiquitin-like Plexin C1 | 36 | 33 |
W8VCT6 | YajG | 181 | 2iqi | Anti-codon binding | 97.6 | 12 | 2k7r | Primosomal protein DnaI | 85.6 | 20 |
W8VJF0 | YfhG | 235 | 1bgf | STAT-4 txn factor | 85.7 | 16 | 4c47 | SadB trimeric lipoprotein | 57.9 | 27 |
W8V2D5 | RlpA | 382 | 4avr | Unknown PA4485 | 100 | 40 | 1x60 | Peptidoglcan-binding protein | 99.6 | 24 |
W8V0V3 | YncD | 701 | 3qIb | Enantio-pyochelin receptor | 100 | 19 | 2grx | FhuA | 100 | 24 |
A6T9R7 | Hyp. | 68 | 2k57 | Sm-like ribonucleoprotein | 99.9 | 25 | 2rb6 | Sm-like ribonucleoprotein | 99.9 | 45 |
W8UZI7 | Slp | 215 | 4f54 | Vpi-5482 | 67 | 13 | 2vbc | NS3 hydrolase/protease | 46.1 | 18 |
W8V038 | YdiY | 252 | 2k0I | OmpA | 97.4 | 14 | 2iwv | OmpG | 97.1 | 15 |
W8V807 | YfaZ2 | 180 | 3qra | Ail | 99.6 | 21 | 2k0I | OmpA | 99.5 | 18 |
A6T8N5 | YdgH | 316 | 2jna | YdgH | 100 | 27 | 4evu | YdgH | 100 | 85 |
A6T9R8 | YncE | 353 | 3vh0 | YncE, DNA binding protein | 100 | 80 | 3u4y | Unknown dtox_1751 | 100 | 13 |
A6TCL1 | YfiB | 127 | 2i26 | Rv0899 membrane protein | 100 | 36 | 3td4 | Omp38 | 100 | 37 |
W8VKY8 | YnfB | 114 | 2y6x | Photosystem II protein | 33.5 | 30 | 2kmf | Photosystem II protein | 33.1 | 25 |
Phyre was used to model proteins of unknown function. Two structural models with the highest alignment accuracies and their respective protein templates are listed for each query. The RCSB Protein database indentification (PDB) is given for each template. Hyp, hypothetical; Conf, confidence; Id, identity; aa, amino acids.