Skip to main content
. 2015 Apr 20;10(4):e0123219. doi: 10.1371/journal.pone.0123219

Table 2. Phyre structural predictions for K. pneumoniae hypothetical proteins.

Uniprot ID Protein Length (aa) 1st Hit PDB Protein Template Conf Id 2nd Hit PDB Template Conf Id
W8VNC5 OmpU 381 1osm OmpK36 100 16 3nsg OmpF 100 15
G8VZE7 Hyp 313 3dkt Maritamacin 99.5 14 2e0z Virus-like particle 97.7 18
G8VZH0 Hyp 1007 2bcm DaaE adhesin 31 25 2khr MbtH 24.3 50
W8VEP4 OmpX 172 1qj8 OmpX 100 82 3qra Ail 100 45
W8VLL9 OmpW 224 2f1t OmpW 100 84 2x27 OprG 100 49
W8VBM4 YbjP 171 4hzb Tae3 T6SS immunity 96.7 13 2cw9 Tim44 domain 28.9 16
W8VBT5 YedD 144 4hwm YedD 100 97 1ggl CRBP, lipocalin 23.2 13
W8VPI0 YfaZ 181 1qj8 OmpX 99.8 16 3qra Ail 99.7 12
W8VA83 YgaU 149 2l9y Lectin 99.7 36 2djp SB145-LysM domain 99.5 24
W8UYP1 YohG 479 1wp1 OprM 100 26 3pik CusC 100 25
W8URS1 YiaF 250 1fc2 Igg-binding protein 66.2 36 1lp1 Igg-binding, Protein Z 62.9 38
W8VJJ2 VacJ 285 4e71 Rho-binding protein, Plexin B2 37.9 47 3kuz Ubiquitin-like Plexin C1 36 33
W8VCT6 YajG 181 2iqi Anti-codon binding 97.6 12 2k7r Primosomal protein DnaI 85.6 20
W8VJF0 YfhG 235 1bgf STAT-4 txn factor 85.7 16 4c47 SadB trimeric lipoprotein 57.9 27
W8V2D5 RlpA 382 4avr Unknown PA4485 100 40 1x60 Peptidoglcan-binding protein 99.6 24
W8V0V3 YncD 701 3qIb Enantio-pyochelin receptor 100 19 2grx FhuA 100 24
A6T9R7 Hyp. 68 2k57 Sm-like ribonucleoprotein 99.9 25 2rb6 Sm-like ribonucleoprotein 99.9 45
W8UZI7 Slp 215 4f54 Vpi-5482 67 13 2vbc NS3 hydrolase/protease 46.1 18
W8V038 YdiY 252 2k0I OmpA 97.4 14 2iwv OmpG 97.1 15
W8V807 YfaZ2 180 3qra Ail 99.6 21 2k0I OmpA 99.5 18
A6T8N5 YdgH 316 2jna YdgH 100 27 4evu YdgH 100 85
A6T9R8 YncE 353 3vh0 YncE, DNA binding protein 100 80 3u4y Unknown dtox_1751 100 13
A6TCL1 YfiB 127 2i26 Rv0899 membrane protein 100 36 3td4 Omp38 100 37
W8VKY8 YnfB 114 2y6x Photosystem II protein 33.5 30 2kmf Photosystem II protein 33.1 25

Phyre was used to model proteins of unknown function. Two structural models with the highest alignment accuracies and their respective protein templates are listed for each query. The RCSB Protein database indentification (PDB) is given for each template. Hyp, hypothetical; Conf, confidence; Id, identity; aa, amino acids.