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. 2015 Mar 19;16(1):54. doi: 10.1186/s13059-015-0627-z

Table 2.

Number of differentially expressed genes

DESeq 20%FDR tweeDESeq 5% FDR Permutation
AF:EU 42 51 329
AF:SA 142 342 633
AF:EA 67 196 477
EU:SA 13 42 393
EU:EA 3 57 286
SA:EA 71 262 493
Total unique 273 719 1,784

The estimated number of differentially expressed genes between each pair of populations, determined using three different methodologies.

Population annotations are as follows: AF = African American, EA = East Asian Americans, EU = European Americans, SA = South Asian Americans.