Table 2.
Summary of genetic-based classification: observed and expected heterozygosity (H o , H e ), percentage of markers with a major frequency allele lower that 0.95 (P95) and number of individuals (N) for the species, groups and subgroups of the genetic-based classification (subgroups with less than 5 accessions are not listed)
| Species | Group | Subgroup | H 0 | H e | P95 | N |
|---|---|---|---|---|---|---|
| SP | 0.042 | 0.205 | 0.557 | 112 | ||
| SP Ecuador | 0.019 | 0.085 | 0.269 | 17 | ||
| SP Ecuador 1 | 0.009 | 0.059 | 0.169 | 10 | ||
| SP Ecuador 2 | 0.037 | 0.084 | 0.207 | 5 | ||
| SP Montane | 0.027 | 0.132 | 0.353 | 12 | ||
| SP Montane 1 | 0.007 | 0.060 | 0.133 | 5 | ||
| SP Montane 2 | 0.041 | 0.139 | 0.364 | 7 | ||
| SP Peru | 0.050 | 0.151 | 0.444 | 83 | ||
| SP Peru 1 | 0.095 | 0.166 | 0.437 | 13 | ||
| SP Peru 2 | 0.059 | 0.138 | 0.405 | 18 | ||
| SP Peru 3 | 0.086 | 0.116 | 0.359 | 9 | ||
| SP Peru 4 | 0.035 | 0.089 | 0.251 | 14 | ||
| SP Peru 7 | 0.046 | 0.093 | 0.243 | 6 | ||
| SP Peru 8 | 0.018 | 0.072 | 0.192 | 6 | ||
| SP Peru 9 | 0.011 | 0.040 | 0.098 | 7 | ||
| SLC | 0.023 | 0.170 | 0.551 | 221 | ||
| SLC Ecuador | 0.038 | 0.188 | 0.522 | 45 | ||
| SLC Ecuador 1 | 0.024 | 0.125 | 0.357 | 12 | ||
| SLC Ecuador 2 | 0.035 | 0.174 | 0.492 | 17 | ||
| SLC Ecuador 3 | 0.004 | 0.095 | 0.241 | 6 | ||
| SLC Vintage | 0.087 | 0.168 | 0.486 | 10 | ||
| SLC Peru | 0.023 | 0.177 | 0.541 | 43 | ||
| SLC Peru 1 | 0.017 | 0.122 | 0.324 | 8 | ||
| SLC Peru 2 | 0.019 | 0.142 | 0.492 | 20 | ||
| SLC Peru 3 | 0.031 | 0.199 | 0.620 | 15 | ||
| SLC SP Peru | SLC SP Peru | 0.031 | 0.116 | 0.323 | 7 | |
| SLC non_Andean | 0.012 | 0.110 | 0.317 | 119 | ||
| SLC Colombia | 0.028 | 0.101 | 0.293 | 7 | ||
| SLC Costa Rica | 0.024 | 0.090 | 0.257 | 8 | ||
| SLC Mesoamerica | 0.009 | 0.079 | 0.262 | 37 | ||
| SLC Asia | 0.007 | 0.071 | 0.197 | 14 | ||
| SLC other | 0.010 | 0.095 | 0.237 | 49 | ||
| SLC 1 | SLC 1 | 0.087 | 0.164 | 0.512 | 7 | |
| SLL | 0.012 | 0.124 | 0.346 | 492 | ||
| SLL vintage | 0.010 | 0.094 | 0.257 | 172 | ||
| SLL Mesoamerica | 0.021 | 0.102 | 0.279 | 33 | ||
| SLL vintage 1 | 0.007 | 0.082 | 0.223 | 120 | ||
| SLL early breed | 0.006 | 0.064 | 0.229 | 14 | ||
| SLL vintage 2 | 0.008 | 0.097 | 0.231 | 5 | ||
| Contemporary SLL | 0.012 | 0.115 | 0.310 | 306 | ||
| SLL fresh | 0.010 | 0.091 | 0.272 | 128 | ||
| SLL vintage/fresh | 0.013 | 0.087 | 0.253 | 54 | ||
| SLL fresh 1 | 0.006 | 0.069 | 0.208 | 69 | ||
| SLL fresh 2 | 0.043 | 0.063 | 0.148 | 5 | ||
| SLL processing 1 | 0.013 | 0.096 | 0.265 | 165 | ||
| SLL processing 1 1 | 0.011 | 0.094 | 0.264 | 37 | ||
| SLL processing 1 2 | 0.012 | 0.084 | 0.003 | 124 | ||
| SLL processing 2 | SLL processing 2 | 0.012 | 0.056 | 0.132 | 13 |