Table 2.
Contig | Repeat type | Length (nt) | Repeat position and sequence (5’-3’) | E-value |
---|---|---|---|---|
JQ756122 | R1 | 16 | 2.10e-3 | |
R2 | 15 | 8.40e-3 | ||
1 | R1 | 16 | 2.25e-3 | |
R2 | 15 | 9.01e-3 | ||
2 | R1 | 16 | 5.62e-4 | |
R2 | 15 | 2.25e-3 | ||
3 | P1 | 14 | 6.23e-3 | |
5 | P2 | 14 | 1.02e-3 | |
6 | P3 | 14 | 7.80e-4 | |
R3 | 13 | 3.12e-3 | ||
7 | R4 | 18 | 1.80e-6 | |
9 | R5 | 14 | 1.82e-4 |
R represents reverse repeat sequences. P represents palindromic repeat sequences. The arrows indicate repeat units.