Table 2.
Receptor | Gene ID | Position cDNA | Reference | ACB-BtS-1 | ACB-BtS-2 | ACB-AbR-1 | ACB-AbR-2 | AA change | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Base | Number | Base | Number | Base | Number | Base | Number | |||||
APN1 | Unigene4279 | 1849 | G | G | 231 | G | 164 | A | 252 | A | 248 | A > T |
APN1 | CL3709.Contig2 | 824 | G | G | 150 | G | 231 | A | 218 | A | 255 | C > Y |
CL3709.Contig2 | 1010 | A | A | 108 | A | 85 | G | 255 | G | 255 | N > S | |
CL3709.Contig2 | 1034 | T | T | 116 | T | 99 | G | 254 | G | 255 | V > G | |
CL3709.Contig2 | 1124 | A | A | 31 | A | 31 | G | 34 | G | 29 | D > G | |
APN1 | CL3709.Contig5 | 774 | T | T | 26 | T | 17 | C | 110 | C | 227 | G > G |
APN1 | CL3709.Contig8 | 171 | A | G | 11 | G | 8 | A | 11 | A | 27 | S > S |
APN2 | Unigene9047 | 479 | G | A | 85 | A | 45 | G | 129 | G | 145 | C > Y |
Unigene9047 | 650 | G | A | 35 | A | 25 | G | 81 | G | 161 | R > P | |
Unigene9047 | 827 | G | C | 26 | C | 13 | G | 77 | G | 178 | W > S | |
APN3 | CL1804.Contig3 | 2998 | T | C | 33 | C | 23 | T | 76 | T | 30 | S > P |
APN3 | CL6793.Contig1 | 754 | A | A | 12 | A | 16 | G | 12 | G | 25 | N > D |
CL6793.Contig1 | 775 | G | G | 19 | G | 18 | A | 20 | A | 22 | A > T | |
CL6793.Contig1 | 1174 | G | G | 23 | G | 22 | A | 22 | A | 22 | E > K | |
APN3 | CL9145.Contig1 | 1303 | T | T | 41 | T | 21 | C | 37 | C | 81 | S > P |
APN3 | Unigene11364 | 688 | G | G | 20 | G | 24 | A | 45 | A | 67 | G > S |
APN3 | Unigene431 | 1249 | G | G | 16 | G | 15 | A | 34 | A | 37 | V > I |
Unigene431 | 1351 | A | A | 23 | A | 23 | C | 42 | C | 37 | N > H | |
APN3 | Unigene5966 | 134 | T | T | 25 | T | 8 | A | 36 | A | 41 | F > Y |
APN7 | Unigene12395 | 521 | T | T | 41 | T | 20 | C | 41 | C | 64 | I > T |
Unigene12395 | 805 | G | G | 92 | G | 47 | A | 131 | A | 147 | V > I | |
Unigene12395 | 1268 | C | C | 66 | C | 24 | T | 103 | T | 104 | P > L | |
Unigene12395 | 1381 | T | T | 229 | T | 137 | C | 185 | C | 255 | Q > Q | |
APN12 | Unigene3586 | 1146 | T | T | 22 | T | 29 | G | 8 | G | 8 | S > S |
APN7 | Unigene887 | 243 | T | C | 129 | C | 68 | T | 74 | T | 87 | V > V |
Unigene887 | 252 | T | C | 117 | C | 61 | T | 78 | T | 88 | D > D | |
Unigene887 | 261 | C | T | 117 | T | 62 | C | 83 | C | 93 | N > N | |
Unigene887 | 270 | T | C | 108 | C | 62 | T | 82 | T | 93 | C > C | |
Cadherin-like protein | CL8807.Contig8 | 2798 | C | T | 56 | T | 33 | C | 62 | C | 54 | P > P |
CL8807.Contig8 | 3110 | G | T | 149 | T | 68 | G | 127 | G | 76 | V > G | |
Cadherin-like protein | Unigene3408 | 1368 | T | A | 166 | A | 202 | T | 171 | T | 159 | G > V |
Unigene3408 | 1934 | A | A | 161 | A | 227 | T | 254 | T | 254 | R > R | |
ALP | CL2676.Contig2 | 474 | A | G | 8 | G | 4 | A | 31 | A | 25 | N > I |
ALP | CL944.Contig2 | 2955 | C | T | 43 | T | 33 | C | 17 | C | 21 | F > L |
*Position: the position of SNP existed in a certain Unigene; Base: best nucleotide covering the position; Number: number of the best nucleotide on the certain position; AA change: amino acid change.