Table 1. Distribution of clusters of resistance gene and defense response genes over the twelverice chromosomes.
O. sativa ssp. japonica | |||||||||
Chr. No. | NBS-LRR | LZ-NBS-LRR | LRR-TM | LRR | DR | Mixed | Total clusters | Genes in clusters(%) | Total genes |
1 | 1 | 1 | 1 | 12 | 5 | 4 | 24 | 91(63.6) | 143 |
2 | 2 | 1 | 0 | 4 | 0 | 10 | 17 | 47(49.5) | 95 |
3 | 0 | 0 | 1 | 2 | 5 | 5 | 13 | 29(39.1) | 74 |
4 | 2 | 0 | 0 | 6 | 1 | 0 | 9 | 23(44.2) | 52 |
5 | 1 | 0 | 2 | 3 | 4 | 3 | 13 | 39(52.7) | 74 |
6 | 4 | 0 | 0 | 3 | 3 | 9 | 19 | 52(65.8) | 79 |
7 | 1 | 0 | 5 | 1 | 0 | 4 | 11 | 34(46.6) | 73 |
8 | 0 | 1 | 0 | 4 | 1 | 7 | 13 | 36(48.0) | 75 |
9 | 0 | 1 | 6 | 0 | 2 | 3 | 12 | 27(51.9) | 52 |
10 | 0 | 1 | 1 | 3 | 0 | 3 | 8 | 23(48.9) | 47 |
11 | 7 | 0 | 2 | 12 | 1 | 9 | 31 | 92(73.0) | 126 |
12 | 5 | 0 | 1 | 4 | 2 | 4 | 16 | 37(58.7) | 63 |
Total | 23 | 5 | 19 | 54 | 24 | 61 | 186 | 530(55.6) | 953 |
O. sativa ssp. indica | |||||||||
1 | 1 | 1 | 0 | 9 | 4 | 13 | 28 | 89(69.5) | 128 |
2 | 1 | 0 | 1 | 6 | 0 | 10 | 18 | 47(55.9) | 84 |
3 | 0 | 0 | 0 | 5 | 2 | 7 | 14 | 33(43.3) | 76 |
4 | 1 | 0 | 0 | 4 | 1 | 2 | 8 | 18(39.1) | 46 |
5 | 0 | 0 | 1 | 2 | 1 | 8 | 12 | 38(55.8) | 68 |
6 | 2 | 0 | 0 | 6 | 2 | 10 | 20 | 46(74.1) | 62 |
7 | 1 | 0 | 3 | 2 | 1 | 7 | 14 | 37(57.8) | 64 |
8 | 1 | 0 | 0 | 4 | 2 | 2 | 9 | 25(40.9) | 61 |
9 | 0 | 0 | 4 | 2 | 2 | 5 | 13 | 27(56.2) | 48 |
10 | 0 | 0 | 0 | 3 | 0 | 5 | 8 | 20(60.6) | 33 |
11 | 1 | 0 | 1 | 7 | 3 | 12 | 24 | 85(83.3) | 102 |
12 | 2 | 0 | 1 | 2 | 1 | 4 | 10 | 28(66.6) | 42 |
Total | 10 | 1 | 11 | 52 | 19 | 85 | 178 | 493(60.5) | 814 |