Table 2.

Programs that add genotype data to the database

Program name	Table	Behavior
geno	genotypes	populate Genotypes table
genoi	genotypeblocks, snpblocks, marker_info	populate Genotypeblocks, snpblocks, and marker_info tables from Illumina data
genoa	genotypeblocks, snpblocks, marker_info	populate Genotypeblocks, snpblocks, and marker_info tables from Affymetrix data
genok	genotypeblocks, snpblocks, marker_info, members, samples, traits	populate Genotypeblocks, snpblocks, marker_info, members, samples, and traits tables from PLINK binary format data