Table 3.
Coverage of two Illumina-sequenced Cryptosporidium hominis genomes in sequence gaps of the published C. parvum IOWA genome
| Chromosome | Gap in C. parvum IOWA (bp) | Sequence length in C. hominis specimen (bp) | |
|---|---|---|---|
| 37999 | 30976 | ||
| 2 | 100* | 1481 | 1481 |
| 3 | 500 | 5582 | 5576 |
| 4 | 100 (1st)* | >458 | 1450 |
| 4 | 100 (2nd)* | 2937 | 2714 |
| 5 | 100 (1st)* | 14,926 | 14,929 |
| 5 | 100 (2nd)* | 1788 | 1311 |
| 5 | 1,000 (3rd) | Not covered | 467 |
| 6 | 2,500 | 245 | 245 |
| 6 | 100* | >538 (ending with telomeric repeats) | >857 (ending with telomeric repeats) |
| 8 | 10,000 | 19,048 bp deletion spanning entire gap | 19,048 bp deletion spanning entire gap |
*Regions where inversions and translocations of sequences occurred in sequenced C. hominis genomes.