Table 1. Moose HEV PCR primers and probe used in the study.
Primer name | Primer type | Sequence | |
---|---|---|---|
qPCR | |||
HEVF8 | Forward | AGGTGGTGGTTGGGGCCCT | |
HEVR8 | Forward | TGGCGAATGGGTTTGAGGGG | |
HEVP8 | Forward | CGCCTCGACTCGCAGCCATTTGC | |
(FAM probe) | |||
Primers used for HEV typing | |||
First PCR | |||
Pool 1 | ISP-4232A | Forward | GCATTTCRGCYTGGAGYAAGAC |
Pool 1 | ISP-4232B | Forward | GTATATCGGCCTGGAGYAAGAC |
Pool 1 | ISP-4232E | Forward | GYATATCGGCTTGGAGCAAGAC |
Pool 2 | EAP-4576F | Reverse | AGYGTRCCRGGCTCACCRGA |
Pool 2 | EAP-4576E | Reverse | AAYGTACCGGGCTCACCRGA |
Semi-nested PCR | |||
Pool 1 | ISP-4232A | Forward | GCATTTCRGCYTGGAGYAAGAC |
Pool 1 | ISP-4232B | Forward | GTATATCGGCCTGGAGYAAGAC |
Pool 1 | ISP-4232E | Forward | GYATATCGGCTTGGAGCAAGAC |
Pool 3 | IAP-4561E | Reverse | TCACCAGARTGTTTYTTCCATCG |
Pool 3 | IAP-4561F | Reverse | TCTCCAGAGTGCTTTTTCCAGCA |
Pool 3 | IAP-4561M | Reverse | TCACCAGAATGTTTTTTCCAACTG |