Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2015 Apr 24;2015:bau122. doi: 10.1093/database/bau122

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author 2015. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 5. — A keyword-centric view for ProtoBug families according to CS and the number of proteins. Representatives of Pfam keywords are: (A) Cytochrome P450; (B) Ligand-gated ion channel; (C) 7tm odorant receptor; (D) Cadherin domain. Each plot shows the 100 clusters with the highest CSs versus the cluster size (log scale). In most instances the PL70 family and the maximal CS for this keywords coincides (orange symbol in A–D). Insets for C and D show a zoom for the top 15 clusters. For all the keywords, a sharp drop in CS and a substantial increase in the size of the family mark the deterioration in the cluster quality towards the root of the Protobug tree.