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. Author manuscript; available in PMC: 2015 Oct 23.
Published in final edited form as: Nature. 2015 Feb 2;520(7548):553–557. doi: 10.1038/nature14156

Extended Data Table 1. Oligonucleotides utilized in qPCR.

Gene name Forward and reverse oligo. sequences
mGapdh GACTTCAACAGCAACTCCCAC
TCCACCACCCTGTTGCTGTA
mTfam AAGGATGATTCGGCTCAGG
GGCTTTGAGACCTAACTGG
mmt-16S GTTACCCTAGGGATAACAGCGC
GATCCAACATCGAGGTCGTAAACC
mmt-ND6 TTAGCATTAAAGCCTTCACC
CCAACAAACCCACTAACAAT
mmt-Cytb AGTAGACAAAGCCACCTTGA
CCGCGATAATAAATGGTAAG
mmt-Cox1 GCCCCAGATATAGCATTCCC
GTTCATCCTGTTCCTGCTCC
mlfna4 CTTTCCTCATGATCCTGGTAATGAT
AATCCAAAATCCTTCCTGTCCTTC
mlfnb CCCTATGGAGATGACGGAGA
CCCAGTGCTGGAGAAATTGT
mll6 TGATGCACTTGCAGAAAACA
ACCAGAGGAAATTTTCAATAGGC
mViperin ATAGTGAGCAATGGCAGCCT
AACCTGCTCATCGAAGCTGT
mlfit1 CAAGGCAGGTTTCTGAGGAG
GACCTGGTCACCATCAGCAT
mlfit3 TTCCCAGCAGCACAGAAAC
AAATTCCAGGTGAAATGGCA
mlfi44 CTGATTACAAAAGAAGACATGACAGAC
AGGCAAAACCAAAGACTCCA
mlsg15 CTAGAGCTAGAGCCTGCAG
AGTTAGTCACGGACACCAG
mUsp18 GAGAGGACCATGAAGAGGA
TAAACCAACCAGACCATGAG
mlrf7 CAATTCAGGGGATCCAGTTG
AGCATTGCTGAGGCTCACTT
mCxcl10 CCAAGTGCTGCCGTCATTTTC
GGCTCGCAGGGATGATTTCAA
mStat1 CGCGCATGCAACTGGCATATAACT
ATGCTTCCGTTCCCACGTAGACTT
mStat2 TGATCTCTAACAGACAGGTGG
CTGCATTCACTTCTAAGGACTC
mMda5 CGGAAGTTGGAGTCAAAGC
TTTGTTCAGTCTGAGTCATGG
mRig-I GAGTACCACTTAAAGCCAGAG
AATCCATTTCTTCAGAGCATCC
HSV1 ICP27 RNA TTTCTCCAGTGCTACCTGAAGG
TCAACTCGCAGACACGACTCG
HSV1 UL30 RNA CGCGCTTGGCGGGTATTAACAT
TGGGTGTCCGGCAGAATAAAGC
VSV G CAAGTCAAAATGCCCAAGAGTCACA
TTTCCTTGCATTGTTCTACAGATGG
VSV M TATGATCCGAATCAATTAAGATATG
GGGACGTTTCCCTGCCATTCCGATG
LCMV GP TGCCTGACCAAATGGATGATT
CTGCTGTGTTCCCGAAACACT
LCMV NP CAGAAATGTTGATGCTGGACTGC
CAGACCTTGGCTTGCTTTACACAG
MHV68 gDNA ORF40 TAGCCACACCTCCCACGC
ATTCAAGACCTGAACATAGTGC
Vaccinia E9L CGGCTAAGAGTTGCACATCCA
CTCTGCTCCATTTAGTACCGATTCT
HSV1 gDNA TK ATACCGACGATCTGCGACCT
TTATTGCCGTCATAGCGCGG
HSV1 gDNA UL30 ATCACCGACCCGGAGAG
CAGGCGCTTGTTGGTGT
m.mtDNA Dloop 1 AATCTACCATCCTCCGTGAAACC
TCAGTTTAGCTACCCCCAAGTTTAA
m.mtDNA Dloop 2 CCCTTCCCCATTTGGTCT
TGGTTTCACGGAGGATGG
m.mtDNA Dloop 3 TCCTCCGTGAAACCAACAA
AGCGAGAAGAGGGGCATT
m.mtDNA CytB GCTTTCCACTTCATCTTACCATTTA
TGTTGGGTTGTTTGATCCTG
m.mtDNA 16S CACTGCCTGCCCAGTGA
ATACCGCGGCCGTTAAA
m.mtDNA ND4 AACGGATCCACAGCCGTA
AGTCCTCGGGCCATGATT
m.nucDNA Tert CTAGCTCATGTGTCAAGACCCTCTT
GCCAGCACGTTTCTCTCGTT