Table 8. Elution-Test Dataset Imaging Log.
Ribbon | Imaging Session | Imaging Date | primary ab antigen | primary ab raised in | primary ab vendor | primary ab concentration | secondary ab fluorophor | secondary ab against | secondary ab raised in | secondary ab concentration | exposure (ms) | notes/caveats |
---|---|---|---|---|---|---|---|---|---|---|---|---|
This table contains a log of all stains/imaging sessions included in the Elution-Test Dataset (Data Citation 1, Files 1–7 Supplementary Table 1). All secondary antibodies raised in goat and applied at a concentration of 1:150. | ||||||||||||
Ex1-R02-A | 1 | Synapsin1 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 592 | ||
NR2B | Ms | Millipore | 1:500 | Alexa 594 | Ms | Gt | 1:150 | 667 | ||||
vGluT2 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 788 | ||||
2 | Synapsin1 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 592 | |||
NR2B | Ms | Millipore | 1:500 | Alexa 594 | Ms | Gt | 1:150 | 667 | saturated (would now image at 274 ms) | |||
vGluT2 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 788 | ||||
3 | Synapsin1 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 592 | somewhat saturated (would now image at 459 ms) | ||
NR2B | Ms | Millipore | 1:500 | Alexa 594 | Ms | Gt | 1:150 | 667 | saturated (would now image at 235 ms) | |||
vGluT2 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 788 | somewhat saturated (would now image at 575 ms) | |||
Ex1-R07-A | 1 | 3/6/2014 | PSD95 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 2,050 | |
NR2A | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 1,160 | ||||
vGluT1 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 843 | ||||
2 | 4/6/2014 | PSD95 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 2,050 | ||
NR2A | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 1,160 | ||||
vGluT1 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 843 | ||||
3 | 4/6/2014 | PSD95 | Rb | Cell Signaling | 1:300 | Alexa 647 | Rb | Gt | 1:150 | 2,050 | ||
NR2A | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 1,160 | ||||
vGluT1 | GP | Millipore | 1:5,000 | Alexa 488 | GP | Gt | 1:150 | 843 | ||||
Ex1-R07-B | 1 | 3/6/2014 | GAD2 | Rb | Cell Signaling | 1:200 | Alexa 488 | Rb | Gt | 1:150 | 1,180 | |
vGAT | Ms | Synaptic Systems | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 1,090 | ||||
2 | 4/6/2014 | GAD2 | Rb | Cell Signaling | 1:200 | Alexa 488 | Rb | Gt | 1:150 | 1,180 | ||
vGAT | Ms | Synaptic Systems | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 1,090 | vGAT very messy | |||
3 | 4/6/2014 | GAD2 | Rb | Cell Signaling | 1:200 | Alexa 488 | Rb | Gt | 1:150 | 1,180 | ||
vGAT | Ms | Synaptic Systems | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 1,090 | ||||
Ex1-R07-C | 1 | 3/6/2014 | PV25 | Rb | Swant | 1:100 | Alexa 647 | Rb | Gt | 1:150 | 876 | |
Gephyrin | Ms | BD Biosciences | 1:300 | Alexa 594 | Ms | Gt | 1:150 | 964 | ||||
2 | 4/6/2014 | PV25 | Rb | Swant | 1:100 | Alexa 647 | Rb | Gt | 1:150 | 876 | PV ubiquitous | |
Gephyrin | Ms | BD Biosciences | 1:300 | Alexa 594 | Ms | Gt | 1:150 | 964 | ||||
3 | 4/6/2014 | PV25 | Rb | Swant | 1:100 | Alexa 647 | Rb | Gt | 1:150 | 876 | ||
Gephyrin | Ms | BD Biosciences | 1:300 | Alexa 594 | Ms | Gt | 1:150 | 964 | ||||
Ex1-R08-D | 1 | 3/6/2014 | GluR1 | Rb | Millipore | 1:100 | Alexa 488 | Rb | Gt | 1:150 | 800 | background |
GluR2 | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 761 | ||||
2 | 4/6/2014 | GluR1 | Rb | Millipore | 1:100 | Alexa 488 | Rb | Gt | 1:150 | 800 | ||
GluR2 | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 761 | ||||
3 | 4/6/2014 | GluR1 | Rb | Millipore | 1:100 | Alexa 488 | Rb | Gt | 1:150 | 800 | ||
GluR2 | Ms | Millipore | 1:50 | Alexa 594 | Ms | Gt | 1:150 | 761 | ||||
Ex1-R08-E | 1 | 3/6/2014 | Synaptopodin | Rb | Synaptic Systems | 1:500 | Alexa 647 | Rb | Gt | 1:150 | 1,430 | |
GABAARa1 | Ms | NeuroMABs | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 2,240 | almost no signal | |||
2 | 4/6/2014 | Synaptopodin | Rb | Synaptic Systems | 1:500 | Alexa 647 | Rb | Gt | 1:150 | 1,430 | ||
GABAARa1 | Ms | NeuroMABs | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 2,240 | ||||
3 | 4/6/2014 | Synaptopodin | Rb | Synaptic Systems | 1:500 | Alexa 647 | Rb | Gt | 1:150 | 1,430 | ||
GABAARa1 | Ms | NeuroMABs | 1:100 | Alexa 594 | Ms | Gt | 1:150 | 2,240 | ||||
Ex1-R08-F | 1 | 3/6/2014 | Arc | GP | Synaptic Systems | 1:150 | Alexa 647 | Rb | Gt | 1:150 | 2,750 | |
GluR4 | Rb | Cell Signaling | 1:50 | Alexa 488 | Ms | Gt | 1:150 | 1,370 | ||||
2 | 4/6/2014 | Arc | GP | Synaptic Systems | 1:150 | Alexa 647 | Rb | Gt | 1:150 | 2,750 | Arc very saturated | |
GluR4 | Rb | Cell Signaling | 1:50 | Alexa 488 | Ms | Gt | 1:150 | 1,370 | ||||
3 | 4/6/2014 | Arc | GP | Synaptic Systems | 1:150 | Alexa 647 | Rb | Gt | 1:150 | 2,750 | ||
GluR4 | Rb | Cell Signaling | 1:50 | Alexa 488 | Ms | Gt | 1:150 | 1,370 |