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. 2014 Aug 19;12(4):178–186. doi: 10.1016/j.gpb.2014.05.002

Figure 1.

Figure 1

Screenshot of FunMod plugin in action

Screenshot shows the bibliometric network of proteins related to Budd–Chiari syndrome. Proteins are displayed as pink nodes and the size and color density are proportional to the occurrence of the protein term in the literature of Budd–Chiari syndrome. The line between nodes represents the co-occurrence, and its thickness is proportional to the number of times that the proteins are co-cited in the same abstract or figure caption. Cytoscape “Results Panel” displays the results of FunMod analysis. When a particular pathway is selected, all the proteins on this pathway are selected in the network as yellow nodes.