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DEGs in the Chinese isolates shared a similar expression pattern
In total 120 DEGs are shared by both Chinese isolates when compared with P1/7. The hierarchical heatmap (R package: pheatmap) illustrates transcriptional levels (log2 ratios of RPKM, scale is shown at the bottom) for all the DEGs in three strains. The expression levels of DEGs in two Chinese isolates are more similar compared to P1/7.
