Roche 454 FLX + |
23 |
700, up to 1000 |
700 |
Insertions/deletions (indels) at homopolymer regions |
Microbial genome sequencing, human genome sequencing, transcriptomics, metagenomics |
http://www.my454.com/ |
Illumina HySeq 1000 MySeq 2000 V3 |
8 10 |
2 × 100 2 × 150 |
400000 < 600000 |
Indels, especially end of reads |
Microbial genome sequencing, human genome sequencing, transcriptomics, metagenomics |
http://www.illumina.com/systems.ilmn |
SOLiD 4 |
12 |
50 × 35 |
71000 |
End of read substitution errors |
Microbial genome sequencing, human genome sequencing, transcriptomics, metagenomics |
http://www.appliedbiosystems.com/ absite/us/en/home.html |
Ion torrent PGM 318 Chip |
3 |
200 |
1000 |
Indels at homopolymer regions |
Microbial genome sequencing, human genome sequencing, transcriptomics, metagenomics |
http://www.iontorrent.com/ |
Pacific Biosciences |
|
|
|
Random indel errors |
Full-length transcriptomics, discovering large structural variants and haplotypes |
http://www.pacificbiosciences.com/ |