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. 2015 Apr 19;16:123. doi: 10.1186/s12859-015-0554-8

Table 1.

Damaging and tolerated variant sets

Damaging (HGMD) Tolerated (1TGP + ESP)
# initial variants 176523 65377
- # SYN 1333 36546
- # FR/SC/SD 77627 929
# final variants 97653 27902

Damaging and tolerated sets after synonymous-SNVs and frameshift, stop-causing and stop-disrupting variants removal. An instance of the data set is the coding variant relative to the transcript to which overlaps. SYN = synonymous, FR = frameshift, SC = stop-causing, SD = stop-disrupting.