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. 2015 Feb 3;11(2):e1004621. doi: 10.1371/journal.ppat.1004621

Table 1. Distribution of alternative sequences in the four types of H. pylori CagA TPMsa.

Number
TPM type Total EPIYA EPIYT ESIYA ESIYT Other
(n = 7954) (n = 7207) (%) (n = 478) (n = 96) (n = 60) (n = 113)
A 2521 2517 (99.8) 4 0 0 0
Bb 2617 1899 (72.6) 474 96 60 88c
C 1620 1595 (98.5) 0 0 0 25d
D 1196 1196 (100) 0 0 0 0

a From review of Genbank entries to Aug. 8, 2013.

bB-TPM bolded, since most variable.

c B-domain other TPMs include: GSIYD (31), EPVYA (13), ELIYA (12), ESIYD (7), ETIYA (3), EPIYD (3), EHIYA (2), EPTYA (2), EPIYS (2), EPIYV (2), ESVYA (2), DPIYA (1), DPIYD (1), EPVYT (1), QPIYP (1), EPIFT (1), EPIHA (1), EPINA (1), ESIYS (1), EFIYT (1).

d The C-domain other TPMs all are EPIYV (25), which only is present when the B-domain sequence is GSIYD (p<0.0001).