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. 2015 Apr 27;13(Suppl 7):97–109. doi: 10.4137/CIN.S16344

Table 3.

Cloud-based applications for bioinformatics.

CATEGORY APPLICATION DESCRIPTION
Alignment CloudBrush124 Distributed de novo genome assembler based on MapReduce which can be run on a cloud.
CloudBurst74 Short read mapping software for Hadoop based on the RMAP125 mapping tool which can be run on a cloud.
CloudBLAST126 MapReduce based BLAST which can be run on a cloud.
Proteomics Integrated Proteomics Pipeline (IP2)127 Proteomics data analysis pipeline also available on Amazon Web Service.
ProteoCloud128 Proteomics computing pipeline system on the cloud for peptide and protein identifications available on Amazon Web Service.