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. 2015 Apr 14;12:59. doi: 10.1186/s12985-015-0292-6

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© Isok-Paas et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Schematic map of the HPV11 genome and primers used in RACE and RT-PCR analysis. (A) Linear depiction of the HPV11 genome, showing the open reading frames (ORFs), long control region (LCR), promoters (P90, P264 and P674-714) and polyadenylation CSs (Cs4384 and Cs7485). The number before each ORF indicates the first nucleotide of the start codon. The primers used in transcriptome analysis are indicated at the top of the figure with dashed arrows. The number given with each primer represents its 5´ end binding position in the HPV11 genome. (B) Sequences of primers used for RACE and RT-PCR analysis. The position of each primer in the HPV11 genome and its orientation and sequence are indicated.