Table 2.
Methicillin resistant Staphylococcus aureus clones reported in 34 eligible studies.
| Country | Clonal type ST-SCCmec | Clonal complex | spa type | PVL status | agr | References |
|---|---|---|---|---|---|---|
| Algeria | ST80-IV [2B] | 80 | ND | + | III | Ramdani-bouguessa et al., 2006 |
| ST37-IVa [2B] | 30 | ND | + | III | ||
| ST239-III [3A] | 5 | ND | − | I | ||
| ST239-IVa [2B] | 5 | ND | − | I | ||
| ST241-III [3A] | 5 | ND | − | I | ||
| ST637-III [3A] | 5 | ND | − | I | ||
| ST5-IV, IVa [2B] | 5 | ND | +, − | II | ||
| ST635-IV [2B] | 80 | ND | − | III | ||
| ST636-NT | 22 | ND | − | I | ||
| ST80-IV [2B] | 80 | t044 | + | ND | Bekkhoucha et al., 2009 | |
| ST239-III [3A] | 5 | t037 | − | ND | ||
| ST5-IVa [2B] | 5 | t311, t450 | − | ND | ||
| ST88-NT | 88 | t188, t267 | − | ND | ||
| ST80-IV [2B] | 80 | t044, t4143 | + | III | Antri et al., 2011 | |
| ST241-III [3A] | 5 | ND | − | III | ||
| ST8-V [5C] | 5 | ND | − | I | ||
| ST80-IVc [2B] | 80 | ND | +, − | ND | Djoudi et al., 2013 | |
| ST39-II [2A] | 30 | ND | − | ND | ||
| Angola | ST5-IVa [2B] | 5 | t105, t311, t11657 | − | II | Conceição et al., 2014 |
| ST8-IVd, V [2B] | 5 | t104, t1774 | − | I | ||
| ST72-V [5C] | 5 | t3092 | − | I | ||
| ST88-IVa [2B] | 88 | t186, t325, t786, | − | III | ||
| t1951, t3869 | ||||||
| ST5-V [5C] | 5 | t6065 | − | II | ||
| ST2629-V [5C] | 5 | t6065 | − | II | ||
| ST789-V [5C] | 7 | t091 | − | II | ||
| Cameroon | ST5-V [5C] | 5 | t311 | + | II | Breurec et al., 2011b |
| ST88-IV [2B] | 88 | t186 | − | III | ||
| ST8-IV [2B] | 5 | t024, t121, t451 | + | I | ||
| ST1289-V [5C] | 88 | t1339 | + | III | ||
| Egypt | ST80-IVc [2B] | 80 | t042, t044, t070, t983 | + | III | Enany et al., 2010 |
| ST30-IVa [2B] | 30 | t251, t318 | + | III | ||
| ST1010-Xa | 121 | t159, t312 | + | IV | ||
| Gabon | ST8-IV [2B] | 5 | t121 | + | I | Schaumburg et al., 2011; Ateba Ngoa et al., 2012 |
| ST88-IV [2B] | 88 | t186 | − | III | ||
| ST5-IV [2B] | 5 | t653 | − | II | ||
| ST5-IV [2B] | 5 | t653 | − | ND | Schaumburg et al., 2014 | |
| ST8-NT | 5 | t112, t121 | + | ND | ||
| ST45-V [5C] | 45 | t437, t8860 | − | ND | ||
| ST88-IV [2B] | 88 | t4195 | − | ND | ||
| Ghana | ST72-V [5C] | 5 | t537 | − | ND | Egyir et al., 2013 |
| ST8-V [5C] | 5 | t064 | − | ND | ||
| ST88-IV [2B] | 88 | t325, t1951, t2649 | − | ND | ||
| ST72-V [5C] | 5 | t537 | − | ND | Egyir et al., 2014b | |
| ST8-IV [2B] | 5 | t121 | + | ND | ||
| ST239-III [3A] | 5 | t037 | − | ND | ||
| ST250-I [1B] | 5 | t928 | − | ND | ||
| ST2021-V [5C] | 5 | t024 | − | ND | ||
| ST88-IV [2B] | 88 | t186 | − | ND | ||
| ST789-IV [2B] | 7 | t547 | + | ND | ||
| ST508-V [5C] | 45 | t5132 | − | ND | Egyir et al., 2014a | |
| Kenya | ST239-III [3A] | 5 | t037 | − | ND | Aiken et al., 2014 |
| Madagascar | ST8-IV [2B] | 5 | t121 | + | I | Breurec et al., 2011b |
| ST30-V [5C] | 30 | t4686 | − | III | ||
| ST88-IV [2B] | 88 | t186 | − | III | ||
| Morocco | ST239, ST241-III [3A] | 5 | t037, t138 | − | I | |
| ST5-IV [2B] | 5 | t311 | + | II | ||
| Niger | ST239, ST241-III [3A] | 5 | t138 | − | I | |
| ST239, ST241-V [5C] | 5 | t037 | − | I | ||
| ST88-IV [2B] | 88 | t186 | − | III | ||
| Nigeria | ST8-IV [2B] | 5 | ND | − | ND | Adesida et al., 2005 |
| ST88-IV [2B] | 88 | t186 | + | III | Ghebremedhin et al., 2009 | |
| ST241-IV [2B] | 5 | t037 | − | I | ||
| ST250-I [1B] | 5 | t194, t292 | − | I | ||
| ST241-III [3A] | 5 | t037 | − | ND | Shittu et al., 2011 | |
| ST8-V [5C] | 5 | t064 | − | ND | ||
| ST8-V [5C] | 5 | t451 | − | ND | ||
| ST94-IV [2B] | 5 | t008 | − | ND | ||
| ST5-V [5C] | 5 | t002 | − | ND | ||
| ST241-III [3A] | 5 | t037 | − | ND | Shittu et al., 2012 | |
| ST88-IV [2B] | 88 | t729, t1603 | − | ND | ||
| ST37-III [3A] | 30 | t074 | − | ND | ||
| ST39-II [2A] | 30 | t007 | − | ND | ||
| ST8-V [5C], IV [2B], ST8-NT | 5 | t064 | − | ND | ||
| ST152-NT | 152 | t4690 | + | ND | ||
| ST1-V [5C] | 5 | ND | + | ND | Raji et al., 2013 | |
| ST239-III[3A]mercury | 5 | ND | − | ND | ||
| ST5-II [2A] | 5 | ND | − | ND | ||
| ST8-V [5C] | 5 | ND | − | ND | ||
| ST247-I [1B] | 5 | ND | − | ND | ||
| ST772-V [5C] | 5 | ND | + | ND | ||
| ST88-IV [2B] | 88 | ND | − | ND | ||
| ST241-III [3A] | 5 | ND | − | ND | Okon et al., 2009 | |
| Senegal | ST5-IV [2B]* | 5 | t311 | + | ND | Fall et al., 2012 |
| ST88-IV [2B]* | 88 | t3489 | − | ND | ||
| ST239, ST241-III [3A] | 5 | t037, t138 | − | I | Breurec et al., 2011b | |
| ST5-II [2A] | 5 | t311 | + | II | ||
| ST5-IV [2B] | 5 | t311 | + | II | ||
| ST88-IV [2B] | 88 | t168 | − | III | ||
| South Africa | ST5-IV [2B] | 5 | ND | ND | ND | Essa et al., 2009 |
| ST8-IV [2B] | 5 | ND | ND | ND | ||
| ST8-II [2A] | 5 | ND | ND | ND | ||
| ST239-III [3A] | 5 | ND | ND | ND | ||
| ST45-IV [2B] | 45 | ND | ND | ND | ||
| ST612-IV [2B] | 5 | ND | − | ND | Goering et al., 2008 | |
| ST36-II [2A] | 30 | ND | − | ND | ||
| ST1173-IV [2B] | 5 | t064 | − | ND | Shittu et al., 2009 | |
| ST1338-IV [2B] | 5 | t064 | − | ND | ||
| ST239-III [3A] | 5 | t037 | − | ND | ||
| ST5-III [3A] | 5 | t045 | − | ND | ||
| ST239-III [3A] | 5 | t037 | − | ND | Moodley et al., 2010 | |
| ST612-IV [2B] | 5 | t064 | − | ND | ||
| ST5-I [1B] | 5 | t045 | − | ND | ||
| ST22-IV [2B] | 22 | t032 | − | ND | ||
| ST22-IV [2B] | 22 | t891 | + | ND | ||
| ST36-II [2A] | 30 | t012 | − | ND | ||
| ST239-III [3A] | 5 | t037 | − | ND | Jansen van Rensburg et al., 2011 | |
| ST5-I [1B] | 5 | t045 | ND | ND | ||
| ST650-IV [2B] | 5 | t002 | ND | ND | ||
| ST612-IV [2B] | 5 | t064, t1443, t2196 | ND | ND | ||
| ST72-NT | 5 | t3092 | ND | ND | ||
| ST22-IV [2B] | 22 | t032 | ND | ND | ||
| ST36-II [2A] | 30 | t012, t021 | ND | ND | ||
| ST5-I [1B] | 5 | t002 | − | II | Oosthuysen et al., 2014 | |
| ST8-V [5C] | 5 | t064 | − | I | ||
| ST612-IV [2B] | 5 | t064 | + | I | ||
| ST239-III [3A] | 5 | t021 | − | I | ||
| ST22-V [5C] | 22 | t891 | + | I | ||
| ST22-IV [2B] | 22 | t891 | − | I | ||
| ST36-II [2A] | 30 | t021 | − | III | ||
| São Tome | ST5-IVa [2B] | 5 | t105 | − | II | Conceição et al., 2013 |
| and Príncipe | ST105-II [2A] | 5 | t002 | − | II | |
| ST8-V [5C] | 5 | t451 | − | I | ||
| ST8-IV [2B] | 5 | t451 | − | I | ||
| ST88-IVa [2B] | 88 | t186, t786 | − | III | ||
| Tunisia | ST80-IV [2B] | 80 | t044 | + | III | Ben Nejma et al., 2009 |
| ST80-IV [2B] | 80 | t044 | + | III | Ben Nejma et al., 2013 | |
| ST728-IVc [2B] | 80 | t042, t044 | + | III | Kechrid et al., 2011 | |
| ST8-IVc [2B] | 5 | t062 | + | II | ||
| ST80-IVc [2B] | 80 | t203 | + | III | Ben Slama et al., 2011 | |
| ST1-NT | 5 | t035 | − | III | Ben Jomàa-Jemili et al., 2013 | |
| ST247-I [1B] | 5 | t040 | − | I | ||
| ST239-III [3A] | 5 | t003 | − | I | ||
| ST241-III [3A] | 5 | t125 | − | I | ||
| ST97-NT | 5 | t003 | − | I | ||
| ST1819-I [1B] | 5 | NS | − | I | ||
| ST80-IVc [2B] | 80 | t070 | + | III | ||
| ST2563-IVc [2B] | 80 | t070 | + | III | ||
| ST1440-IVc [2B] | 80 | t070 | + | III | ||
| ST80-IVc [2B] | 80 | t1021 | − | II | ||
| ST80-IVc [2B] | 80 | ND | − | III | ||
| ST22-NT | 22 | t998 | − | II | ||
| ST45-NT | 45 | ND | − | I | ||
| ST153-NT | 80 | NST | + | III | ||
| ST153-NT | 80 | t044 | ND | III | Gharsa et al., 2012 |
agr, Accessory gene regulator; CC, Clonal complex; NT, Non typeable; ND, Not determined; NST, New spa type; PVL, Panton-Valentine Leukocidin genes; SCCmec, Staphylococcal chromosomal cassette mec element; ST, Sequence type; spa, Staphylococcus aureus protein A gene; Xa, Unknown SCCmec type other than I, II, III, IV or V;
*
Clones isolated from pigs;
+, PVL positive; −, PVL negative.