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. 2015 Apr 30;11(4):e1004187. doi: 10.1371/journal.pcbi.1004187

Table 4. Conditional distributions used for updating via Gibbs sampling for Q epidemic quantities.

Parameter Conditional distribution
λ i Gamma(aλ+Q,b^λi+q=1Qθμ,q(xi,q-μq)2-θν,q(yi,q-νq-βq(xi,q-μq))22) for b^λi=bλ for all modeling assumptions i in the NHW method,b^λi=aλ/mλ for all modeling assumptions i in the SHW method and b^λi=aλ/m^λi in the IHW method.
μ q Normal(μ-,σμ2) with σμ2=(θμ,qλi+θν,qβq2λi+τ0,q)-1μ-=σμ2(θμ,qλixi,q-θν,qβqλi(yi,q-νq-βqxi,q)+τ0,qx0,q)
v q Normal(ν-,(θν,qλi)-1) with ν-=λi(yi,q-βq(xi,q-μq))λi
β q Normal(β-,σβ2) with σβ2=(θν,qλi(xi,q-μq)2)-1 β-=σβ2θν,q-1λi(yi,q-νq)(xi,q-μq)
θ μ, q for q ≠ 1 Gamma(aθ+N2,bθ+λi(xi,q-μq)22)
θ v, q Gamma(aθ+N2,bθ+λi(yi,q-νq-βq(xi,q-μq))22)
τ 0, q Gamma(aτ,q+1/2,bτ,q+(xi,q-μq)22)
φ 0, q Gamma(a ϕ, q, b ϕ, q)