View full-text article in PMC PLoS Comput Biol. 2015 Apr 30;11(4):e1004187. doi: 10.1371/journal.pcbi.1004187 Search in PMC Search in PubMed View in NLM Catalog Add to search Copyright and License information © 2015 Lindström et al This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. PMC Copyright notice Table 4. Conditional distributions used for updating via Gibbs sampling for Q epidemic quantities. Parameter Conditional distribution λ i Gamma(aλ+Q,b^λi+∑q=1Qθμ,q(xi,q-μq)2-θν,q(yi,q-νq-βq(xi,q-μq))22) for b^λi=bλ for all modeling assumptions i in the NHW method,b^λi=aλ/mλ for all modeling assumptions i in the SHW method and b^λi=aλ/m^λi in the IHW method. μ q Normal(μ-,σμ2) with σμ2=(∑θμ,qλi+θν,qβq2∑λi+τ0,q)-1μ-=σμ2(∑θμ,qλixi,q-θν,qβq∑λi(yi,q-νq-βqxi,q)+τ0,qx0,q) v q Normal(ν-,(θν,q∑λi)-1) with ν-=∑λi(yi,q-βq(xi,q-μq))∑λi β q Normal(β-,σβ2) with σβ2=(θν,q∑λi(xi,q-μq)2)-1 β-=σβ2θν,q-1∑λi(yi,q-νq)(xi,q-μq) θ μ, q for q ≠ 1 Gamma(aθ+N2,bθ+∑λi(xi,q-μq)22) θ v, q Gamma(aθ+N2,bθ+∑λi(yi,q-νq-βq(xi,q-μq))22) τ 0, q Gamma(aτ,q+1/2,bτ,q+(xi,q-μq)22) φ 0, q Gamma(a ϕ, q, b ϕ, q)