Table 3.
Summary of top Wojczynski et al. [8] meta analysis SNP
| Chr | SNP | SNP position | YRI minor allele | YRI freq | δ | Meta allele | Meta p-value | Meta directions | Meta effect | Meta SE | SNP type | Nearby genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6 | rs6929568 | 8228942 | T | 0.48 | 0.20 | T | 9.77 E-07 | -------+ | -0.08 | 0.02 | intergenic | EEF1E1,SLC35B3,SCARNA27,TXNDC5,BMP6 |
| 6 | rs2327037 | 8228490 | G | 0.48 | 0.21 | A | 1.29 E-06 | +++++++- | 0.08 | 0.02 | intergenic | EEF1E1,SLC35B3,SCARNA27,TXNDC5,BMP6 |
| 6 | rs641753 | 8233377 | G | 0.48 | 0.21 | A | 2.46 E-05 | ++++++-- | 0.07 | 0.02 | intergenic | EEF1E1,SLC35B3,SCARNA27,TXNDC5,BMP6 |
| 6 | rs6924698 | 8225111 | G | 0.46 | 0.23 | C | 7.76 E-05 | +++++++- | 0.06 | 0.02 | intergenic | EEF1E1,SLC35B3,SCARNA27,TXNDC5,BMP6 |
| 6 | rs7771592 | 8223599 | A | 0.46 | 0.23 | A | 9.77 E-05 | -------+ | -0.06 | 0.02 | intergenic | EEF1E1,SLC35B3,SCARNA27,TXNDC5,BMP6 |
| 15 | rs7180916 | 26230533 | G | 0.44 | 0.41 | A | 8.32 E-05 | ++++++++ | 0.06 | 0.02 | genic | uncharacterized locus- LOC100128714 (RP11-1084I9.1) |
Chr=chromosome.