Table 2.
Summary of epitopes used for ELISA, ELISPOT, and tetramer analyses
| Peptide (Residue) | Abbreviation | Sequence | Confirmed by |
|---|---|---|---|
| Nuclear or stress-response related proteins | |||
| Bip-1525–541 | Bip-1 | TITNDQNRLTPEEIERM | E |
| Bip-1[cit]525–541 | Bip-1-cit | TITNDQNZLTPEEIERM | E |
| Bip-2298–314 | Bip-2 | ALSSQHQARIEIESFYE | E |
| Bip-2[cit]298–314 | Bip-2-cit | ALSSQHQAZIEIESFYE | E |
| Histone H1b205–219 | H1b | KPKAAKPKKAAAKKK | E, ES |
| CENP-A222–31 | CENP-A2 | PTPGPSRRGP | E |
| CENP-A297–111 | CENP-A3 | AAEAFLVHLFEDAYL | E |
| CENP-A47–16 | CENP-A4 | SRKPEAPRRR | E |
| La13–27 | La | LEAKICHQIEYYFGD | E, ES, T |
| U1 snRNP Sm-D97–109 | snRNP-1 | RGRGRGRGRGRGR | E |
| 70 kDa U1snRNP357–373 | snRNP-2 | SHRSERERRRDRDRDRD | E, ES, T |
| 70 kDa U1snRNP112–128 | snRNP-3 | YDTTESKLRREFEVYGP | E |
| Structural proteins | |||
| Fibrinogen B420–434 | Fib-β | PRKQCSKEDGGGWWY | E |
| Fibrinogen B420–434-[cit] | Fib-β-cit | PZKQCSKEDGGGWWY | E |
| Fibromodulin249–265 | FMOD | LYMEHNNVYTVPDSYFR | E |
| Fibromodulin249–265-[cit] | FMOD-cit | LYMEHNNVYTVPDSYFZ | E |
E=ELISA, ES=ELISPOT, T= Tetramer, [cit] or Z=citrullinated arginine