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. 2015 Apr 25;6(5):351–362. doi: 10.1007/s13238-015-0163-3

Table 1.

Data collection and refinement statistics

Parameters Native SeMet
Data collection statistics
Cell parameters
 a (Å) 59.8 59.3
 b (Å) 162.9 162.9
 c (Å) 31.3 31.1
 α, β, γ (°) 90.0, 90.0, 90.0 90.0, 90.0, 90.0
Space group P2 1 2 1 2 P2 1 2 1 2
Wavelength used (Å) 0.9785 0.9785
Resolution (Å) 40.7–1.79 (1.86–1.79)c 40.1–2.4 (2.49–2.40)
No. of all reflections 312,740 (14,770) 158,723 (7888)
No. of unique reflections 29,588 (1477) 12,497 (580)
Completeness (%) 99.16 (93.53) 99.50 (96.14)
Average I/σ (I) 20.04 (3.94) 34.08 (8.9)
Rmergea (%) 8.4 (54.6) 16.6 (45.1)
Refinement statistics
No. of reflections used (σ(F) > 0) 29492
Rworkb (%) 19.19
Rfreeb (%) 22.30
r.m.s.d. bond distance (Å) 0.011
r.m.s.d. bond angle (º) 1.19
Average B-value (Å2) 39.5
No. of protein atoms 2512
No. of ligand atoms 0
No. of solvent atoms 293
Ramachandran plot
 Res. in favored regions (%) 98.23
 Res. in generously allowed regions (%) 1.77
 Res. in disallowed regions (%) 0

a R merge = ΣhΣl | I ih − <I h> |/ΣhΣI <I h>, where <I h> is the mean of the observations I ih of reflection h

b R work = Σ(||F p(obs)| − |F p(calc)||)/Σ|F p(obs)|; R free is an R factor for a pre-selected subset (5%) of reflections that was not included in refinement

cNumbers in parentheses are corresponding values for the highest resolution shell