TABLE 1 .
Organism name | Panela | AOAC nameb | GenBank accession no. | Qualityc | Assembly size (bp) | No. of plasmids |
---|---|---|---|---|---|---|
F. tularensis subsp. tularensis | ||||||
WY96 | I | FT9 | CP010103 | Finished | 2,047,033 | 1 |
Schu_S4 | I | FT4 | CP010290 | Finished | 1,892,789 | 0 |
Scherm | I | FT8 | CP010287 | Finished | 1,890,922 | 0 |
NIH B-38 | I | FT1 | CP010115 | Finished | 1,862,444 | 0 |
F. tularensis subsp. novicida | ||||||
U112 | E | FTNN9 | CP009633 | Finished | 1,910,592 | 0 |
F6168 | E | FTNN8 | CP009352–CP009353 | Finished | 1,927,240 | 1 |
D9876 | E | FTNN7 | CP009607 | Finished | 1,870,206 | 0 |
F. tularensis subsp. holartica | ||||||
VT68 | I | FT6 | CP010288 | Finished | 1,893,733 | 0 |
LVS | I | FT2 | CP009694 | Finished | 1,892,177 | 0 |
JAP | I | FT5 | JUJU00000000 | IHQD (2) | 1,907,159 | 0 |
FTT_1 | I | FT3 | CP009693 | Finished | 1,892,758 | 0 |
425 | I | FT7 | CP010289 | Finished | 1,894,186 | 0 |
F. philomiragia | ||||||
O#319l | E | FTNN1 | CP010019 | Finished | 2,017,400 | 0 |
O#319-067 | E | FTNN4 | CP009436–CP009437 | Finished | 2,049,711 | 1 |
O#319-036 | E | FTNN3 | CP009442–CP009443 | Finished | 1,924,061 | 1 |
O#319-029 | E | FTNN2 | CP009342–CP009343 | Finished | 2,044,934 | 1 |
GA01-2801 | E | FTNN6 | CP009444–CP009446 | Finished | 2,033,714 | 2 |
GA01-2794 | E | FTNN5 | CP009440–CP009441 | Finished | 2,152,054 | 1 |
I, inclusivity strain; E, exclusivity strain.
AOAC, Association of Analytical Communities.
Quality refers to the quality of the genome assembly, as defined by Chain et al (6). The number of contigs for the IHQD assembly is listed in parentheses.