Table 2.
Summary of peptide fragments observed in MALDI-TOF mass spectra of a CTB tryptic digest.
Fragment (amino acid start-end) | Sequence | Calculated MH+ (Da) | occurrence frequency* | Confirmed by MS/MS? |
---|---|---|---|---|
64-67# | (K)AIER(M) | 488.28 | 3/4 | |
70-73 | (K)DTLR(I) | 504.28 | 1/4 | |
64-69 (1 Oxidation) or 68-73# | (K)AIERMK(D) or (R)MKDTLR(I) | 763.41 | 3/4 | |
68-73 (1 Oxidation) | (R)MKDTLR(I) | 779.4 | 3/4 | |
74-81# | (R)IAYLTEAK(V) | 908.51 | 3/4 | |
36-43# | (R)EMAIITFK(N) | 952.52 | 4/4 | |
35-43 | (K)REMAIITFK(N) | 1108.62 | 1/4 | |
35-43 (1 Oxidation) | (K)REMAIITFK(N) | 1124.61 | 4/4 | |
24-34# | (K)IFSYTESLAGK(R) | 1215.62 | 4/4 | Y |
24-35 | (K)IFSYTESLAGKR(E) | 1371.72 | 4/4 | Y |
44-62# | (K)NGATFQVEVPGSQHIDSQK(K) | 2041.99 | 4/4 | Y |
44-63 | (K)NGATFQVEVPGSQHIDSQKK(A) | 2170.09 | 4/4 |
Occurrence frequency is the number of samples in which the fragment peak appeared/total samples. Four samples were analyzed.
These peptides were also detected by van Baar et al. [39]