Table 1.

Composition of small RNA in deep sequenced libraries from larva male (LM), larva female (LF), pupa male (PM), pupa female (PF), adult male (AM) and adult female (AF) mosquito

Sample name	Raw reads	Reads post adaptor trimming	18-30 nt reads	Reads mapped to ncRNAs	Reads mapped to known miRNAs	Reads mapped to coding region of Anopheles	Reads mapped to An.stephensi genome
LM	3.5 × 106	3.3 × 106	3.3 × 106	5.6 × 105	1.1 × 104	2.9 × 104	2.9 × 105
LF	2.7 × 106	2.6 × 106	2.3 × 106	5.4 × 105	6.3 × 104	4.7 × 104	1.8 × 105
PM	1.6 × 107	1.2 × 107	4.0 × 106	7.5 × 105	6.2 × 105	1.1 × 105	4.0 × 105
PF	1.9 × 107	1.2 × 107	6.7 × 106	1.3 × 106	8.3 × 105	1.5 × 105	7.0 × 105
AM	2.5 × 107	2.4 × 107	9.6 × 106	7.9 × 105	2.6 × 106	5.8 × 104	9.9 × 105
AF	5.4 × 106	4.4 × 106	2.8 × 106	1.9 × 105	7.8 × 105	1.9 × 104	5.2 × 105
Total	7.2 × 107	5.9 × 107	2.8 × 107	4.1 × 106	4.9 × 106	4.2 × 105	3.1 × 106