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. 2015 May 4;10(5):e0125574. doi: 10.1371/journal.pone.0125574

Table 4. Identification success rates of single regions and their combinations using TAXONDNA program under ‘best match’ and ‘best close match’ methods based on the data from Schisandraceae.

DNA barcodes N * species N sequences Best match (%) Best close match (%) Threshold (%)
Correct Ambiguous Incorrect Correct Ambiguous Incorrect No match
ITS1 32 122 50.00 49.10 0.81 49.18 49.18 0.81 0.81 0.66
ITS2 32 122 46.72 50.00 3.27 46.72 50.00 0.81 2.45 1.30
ITS 32 122 58.19 39.34 2.45 55.73 38.52 1.63 4.09 0.56
trnH-psbA 25 106 62.26 32.07 5.66 62.26 32.07 5.66 0.00 4.65
matK 28 109 40.36 59.63 0.00 40.36 59.63 0.00 0.00 0.47
rbcL 27 113 21.23 78.76 0.00 21.23 78.76 0.00 0.00 0.13
ITS+trnH-psbA 24 99 75.75 17.17 7.07 75.75 17.17 7.07 0.00 2.51
ITS+matK 24 99 77.77 17.17 5.05 77.77 17.17 5.05 0.00 0.46
ITS+rbcL 27 105 70.47 23.80 5.71 68.57 22.85 5.71 2.85 0.28
trnH-psbA+matK 24 101 62.37 31.68 5.94 62.37 31.68 5.94 0.00 2.27
trnH-psbA+rbcL 25 106 62.26 31.13 6.60 62.26 31.13 6.60 0.00 2.23
matK+rbcL 24 101 47.52 51.48 0.99 47.52 51.48 0.99 0.00 0.33
ITS+trnH-psbA+matK 24 99 85.85 8.08 6.06 85.85 8.08 6.06 0.00 1.70
ITS+trnH-psbA+rbcL 25 106 77.77 13.13 9.09 77.77 13.13 9.09 0.00 1.70
ITS+matK+rbcL 24 99 80.80 12.12 7.07 80.80 12.12 7.07 0.00 0.36
trnH-psbA+matK+rbcL 24 101 62.37 30.69 6.93 62.37 30.69 6.93 0.00 1.58
ITS+trnH-psbA+matK+rbcL 24 99 86.86 5.05 8.08 86.86 5.05 8.08 0.00 1.32

* Species represented by multiple individuals.