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. 2015 Feb 14;17(2):111–120. doi: 10.1007/s12017-015-8342-1

Table 3.

Association results in the GER1 study for four functional candidate SNPs in DAPL1

SNP Position on chr 2 (bp/hg19) Major allele Minor allele MAFb Odds ratio (95 % CI) P a R2c
Cases (%) Controls (%)
rs17810398 159,660,870 C T 13.3 10.5 1.314 (1.033–1.680) 0.027 Ref.
rs6146986 159,661,997–159,662,874 878-bp deletion 13.5 10.7 1.310 (1.033–1.667) 0.027 NA
rs17810816 159,671,992 A G 18.4 13.4 1.435 (1.163–1.778) 8.49 × 10−4 0.866
rs144087548 159,718,894 A T 17.4 13.8 1.296 (1.047–1.609) 0.018 0.735

a P from logistic regression adjusted for age and sex

bMAF: minor allele frequency calculated in 710 cases or 612 controls

cR2 to top variant based on CEU samples from the 1,000 genomes project