Table 2.
Functional Categories Showing Overrepresentation in Large (>100 genes) and Single-Copy Gene Families in Picea
| GO Term | GO-ID | Adjusted P Value (FDR < 0.05) | No. of Picea Genes in Big Families | Total No. of Picea Genes |
|---|---|---|---|---|
| Large gene families | ||||
| Protein kinase activity | 4672 | 0.0000e-100 | 224 | 914 |
| Phosphotransferase activity, alcohol group as acceptor | 16773 | 0.0000e-100 | 224 | 999 |
| Phosphorylation | 16310 | 0.0000e-100 | 200 | 859 |
| Kinase activity | 16301 | 0.0000e-100 | 229 | 1,286 |
| Phosphate metabolic process | 6796 | 3.0000e-100 | 200 | 941 |
| Phosphorus metabolic process | 6793 | 4.0000e-100 | 200 | 943 |
| Transferase activity, transferring phosphorus-containing groups | 16772 | 2.0915e-86 | 230 | 1,566 |
| Protein serine/threonine kinase activity | 4674 | 3.1894e-68 | 122 | 449 |
| Binding | 5488 | 2.1444e-49 | 344 | 5,263 |
| Nucleotide binding | 166 | 1.4177e-46 | 190 | 1,776 |
| Single-copy gene families | ||||
| Nucleobase, nucleoside, nucleotide, and nucleic acid metabolic process | 6139 | 3.6236e-59 | 264 | 1,649 |
| Cellular nitrogen compound metabolic process | 34641 | 1.1583e-57 | 300 | 2,128 |
| Intracellular | 5622 | 2.3325e-57 | 570 | 6,668 |
| Nitrogen compound metabolic process | 6807 | 1.7355e-56 | 302 | 2,187 |
| Nucleic acid metabolic process | 90304 | 1.4867e-53 | 213 | 1,192 |
| Cellular macromolecule metabolic process | 44260 | 1.3065e-51 | 355 | 3,052 |
| Cellular metabolic process | 44237 | 6.7892e-50 | 493 | 5,409 |
| Gene expression | 10467 | 1.7948e-49 | 181 | 931 |
| Macromolecule metabolic process | 43170 | 1.9708e-48 | 368 | 3,346 |
| Primary metabolic process | 44238 | 1.2592e-47 | 469 | 5,056 |