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. 2014 Dec 11;6(3):269–279. doi: 10.1111/jdi.12303

Table 3.

Kyoto Encyclopedia of Genes and Genomes pathways with differentially expressed genes between the two groups

KEGG ID Pathway name Gene symbols C O E R rawP adjP
01100 Metabolic pathways Idi1, Ido2, Chkb, Cyp51, Nsdhl, Cyp2c54, Sds, Nans, Ces3b, Cyp7a1, Asns, Pnliprp1, Sc4 mol, Nnmt, Fdps, Cryl1, Sqle, Ggt6, Cyp2c38, Ces3a, Hsd3b5, Ccbl1, Agpat9, Bdh2, Ldhb, Acss3, Acmsd, Cyp2u1 1184 28 5.4 5.18 1.78E-12 1.16E-10
04630 Jak-STAT signaling pathway Lepr, Socs2, Irf9, Myc, Pim1, Ccnd1, Cish 153 7 0.7 10 7.31E-06 9.50E-05
03320 PPAR signaling pathway Cyp7a1, Aqp7, Lpl, Cpt1b 80 4 0.4 11 0.0005 0.0036
00590 Arachidonic acid metabolism Cyp2c54, Cyp2c38, Ggt6, Cyp2u1 90 4 0.4 9.74 0.0008 0.0047
00561 Glycerolipid metabolism Agpat9, Lpl, Pnliprp1 51 3 0.2 12.9 0.0017 0.0069
00564 Glycerophospholipid metabolism Agpat9, Chkb, Gpd2 80 3 0.4 8.22 0.006 0.015
01040 Biosynthesis of unsaturated fatty acids Acot4, Acot3 25 2 0.1 17.5 0.0058 0.015
04950 Maturity onset diabetes of the young Hhex, Hes1 26 2 0.1 16.9 0.0063 0.0152
04975 Fat digestion and absorption Pnliprp1, Apoa4 45 2 0.2 9.74 0.018 0.0355
00591 Linoleic acid metabolism Cyp2c54, Cyp2c38 46 2 0.2 9.53 0.0188 0.0359
00140 Steroid hormone biosynthesis Hsd3b5, Cyp7a1 55 2 0.3 7.97 0.0263 0.0442

Fold change >1.5, P < 0.05. adjP, P-value adjusted by the multiple test adjustment; C, the number of reference genes in the category; KEGG, Kyoto Encyclopedia of Genes and Genomes; O, the number of genes in the gene set and category; E, the expected number in the category; R, ratio of enrichment; rawP, P-value from hypergeometric test.