Figure 3.

Characterization and annotation of validated TFUs. Alignment of four consensus sequences, derived from the validated TFUs, to the July 2003 version of the UCSC human genome sequence assembly, using the BLAT search tool. (A) TFU00023 corresponds to YourSeq (black) completely overlapping with known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq (dark blue). (B) TFU01102 represents a 5′ extension of a partial cDNA (FLJ23834). (C) TFU01013 represents a new human transcript structure that was correctly predicted by ab initio gene predition transcripts, such as Fgenesh++ (green). (D) TFU00125 represents a new human transcript with no predicted transcripts described by gene prediction programs.