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. 2015 Apr 29;16(1):344. doi: 10.1186/s12864-015-1556-7

Table 2.

Genotype and allele number per locus in the core (CC) and mini core collection (MC)

Locus Observed number of alleles Number of genotypes Shannon’s information index Nei’s expected heterozygosity (Nei’s diversity index)
CC MC CC MC CC MC CC MC
AVRDC-MB41 5 5 9 8 1.013 1.108 0.608 0.651
AVRDC-MB44 4 4 7 7 0.913 1.059 0.54 0.636
AVRDC-MB46 6 6 10 10 0.474 0.752 0.266 0.434
AVRDC-MB59 7 7 12 10 0.762 0.856 0.504 0.508
AVRDC-MB60 3 3 4 4 0.681 0.704 0.48 0.502
AVRDC-MB65 4 4 10 10 1.284 1.287 0.707 0.706
AVRDC-MB99 5 5 10 10 0.721 0.837 0.456 0.499
AVRDC-MB148 3 3 4 4 0.694 0.713 0.497 0.503
AVRDC-MB159 5 5 8 8 0.601 0.802 0.354 0.459
AVRDC-MB162 11 10 36 31 1.503 1.74 0.694 0.768
AVRDC-MB180 13 13 24 24 0.796 1.315 0.355 0.585
AVRDC-MB197 8 8 17 16 0.987 1.297 0.496 0.657
AVRDC-MB204 7 7 17 11 1.126 1.185 0.647 0.661
AVRDC-MB241 5 5 8 8 0.342 0.695 0.145 0.34
AVRDC-MB314 8 6 12 10 0.986 1.123 0.582 0.649
AVRDC-MB340 9 7 15 11 0.747 0.92 0.46 0.542
AVRDC-MB347 5 4 9 6 1.209 1.225 0.667 0.68
DMB-SSR80 3 3 5 5 0.595 0.694 0.398 0.472
DMB-SSR125 4 4 8 8 0.691 0.912 0.381 0.503
DMB-SSR130 7 7 14 13 0.904 1.185 0.473 0.604
Mean 6.1 5.8 12 10.7 0.851 1.02 0.485 0.568
STDEV 2.7 2.5 7.5 6.5 0.284 0.279 0.145 0.108