Table 3. Charges distribution, inter-domain salt bridges and H-bonds in the 3D models of APEHs from T. bernacchii and C. hamatus.
T. bernacchii | C. hamatus | |||||||
---|---|---|---|---|---|---|---|---|
APEH-1 | APEH-2 | APEH-1 | APEH-2 | |||||
N-ter | C-ter | N-ter | C-ter | N-ter | C-ter | N-ter | C-ter | |
Sequence region | 1–450 | 461–728 | 1–420 | 431–690 | 1–450 | 461–729 | 1–420 | 431–690 |
Total negative charges (D+E) | 64 | 29 | 42 | 24 | 56 | 29 | 46 | 24 |
Total positive charges(H+K+R) | 58 | 26 | 51 | 31 | 57 | 27 | 53 | 31 |
Net charge | -6 | -3 | 9 | 7 | 1 | -2 | 7 | 7 |
Total Protein net charge | -9 | 16 | -1 | 14 | ||||
Total Protein Salt bridges | 20 | 20 | 16 | 11 | ||||
Inter-domain salt bridges | 2 | 2 | 4 | 5 | ||||
Total Protein H-bonds | 445 | 465 | 482 | 456 | ||||
Inter-domain H-bonds | 33 | 57 | 48 | 46 |