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. 2015 Mar 20;9(1-2):34–47. doi: 10.1080/19336918.2015.1008333

Table 1.

Summary of transcriptional regulation of the tenascin gene promoters. For each publication cited, the species of the promoter analyzed, the transcription factor(s) over-expressed or growth factors added, the response elements and their sequences and relative position to the TSS are listed together with a short description of the main experimental evidence provided

Gene Promoter species Transcription factor overexpressed or factors added Response element Sequence Position Functional assays
TNC Chicken 24       −3986 to + 121 3986bp more active than 721bp promoter in chicken embryo fibroblasts. 3986bp promoter active in human U251MG cells, but not in HT1080 cells.
  Chicken 36 EVX1 (mouse) TRE/AP1 CTGAGTCAT −281 to −273 Reporter activation in NIH3T3 cells and inactivation by mutation of response elements.
  Chicken 36   HBS 1 TAATGATGAT −1354 to −1345 In vitro binding assay with ftz homeodomain.
      HBS 2 TAATGATTCT −1369 to −1360  
  Chicken 63   AP1 CTGAGTCAT −281 to −273 Reporter activation in chicken embryo fibroblasts; deletion of response element.
      ECM   −570 to −469 Reporter activation on attached but not floating collagen gels; transfer of response to SV40 promoter
  Mouse 23       −247 to + 147 247bp promoter construct was more active than longer constructs in NIH3T3 and chicken fibroblasts
  Mouse 39 POU3F2 (BRN2) octamer ATGCAATG −201 to −193 Reporter activation in mouse mouse N2A cells, but not in rat C6 cells. Binding assays (EMSA, footprint).
      NF1 TGGCGGCGCGCCT −187 to −165 Inactivation of reporter activity by mutation of response element in N2A, C6 and NIH3T3 cells.
    EGR1 (KROX-24) KROX20/24 GCGGGGGCG −256 to −248 In vitro binding assays. Presence of element represses reporter in N2A cells, but not in NIH3T3 or C6 cells.
  Mouse 42,43 PRRX1 (PRX1) HBS CATTAC −57 to −52 Reporter activation in rat A10 vascular SMCs and RFL-6 lung fibroblasts, EMSA and supershift.
  Mouse 58 MKL1 SRE (CArG) CTATTTATGG −1414 to −1423 SRF-dependent reporter activation in NIH3T3 cells and inactivation by mutation of response elements.
    MKL1mutB1     −247 to + 147 SRF-independent SAP domain dependent promoter activation by cyclic strain; ChIP
  Mouse 59 MKL1
MKL1mutB1
    −247 to + 147 SRF-independent SAP domain dependent promoter activation in HC11 mammary epithelial cells
Transcipts induced in SOX4-transfected LNCaP cells.
  Human 86 SOX4        
  Human 20       −220 to +79 220bp promoter more active than longer constructs in SK-Mel-28 and InR1-G9 cells. Positive effect of first 20bp of first exon; inclusion of 1338bp of the first intron in the long promoter construct activates the reporter in SK-Mel-28, but not InR1-G9 cells.
  Human 37 OTX2 OTS TAATCC −530 to −525 In vitro binding assays.
  Human 38 OTX2 OTS TCTAATCCC −531 to −523 Reporter repression in U87-MG human glioblastoma cells; EMSA and binding studies.
  Human 78 TGF-β and SMAD3 and 4ETS1 CAGA1CAGA2EBS1 TCTGGCAGAGTTCC −66 to −62−43 to −39−121 to −118 Reporter activation in human dermal fibroblasts in a complex with CBP-300; mutation of response elements; DNA affinity precipitation; Co-IP`s of complexes.
      EBS4 GGAA −39 to −36  
    SP1 SBS2 GGC −60 to −58  
      SBS3 GGA −39 to −37  
TNC Human 79 PDGF and ETS1,2 and SP1 EBS1EBS3EBS4SBS2 TTCCGGAAAGGATGGAAGGC −121 to −118−76 to −68−39 to −36−60 to −58 Reporter activation in human dermal fibroblasts after PDGF stimulation; mutation of response elements; overexpression of dominant negative TFs; Co-IP`s of complexes
      SBS3 GGA −39 to −37  
    PDGF and FLI1 SBS2SBS3 GGCGGA −60 to −58−39 to −37 Abrogation of PDGF-induced reporter expression in human dermal fibroblasts
  Human 84 EWS-FLI; EWS-ERG (EWS-ETS) EBS1–4 GGAA −130 to −30 Reporter activation in H1299 cells. Endogenous transcripts induced by EWS-ETS, but not FLI or ERG
  Human 85 JUNRELA (p65) GCN4NFkB TGAGTGGGGAATTCCT −149 to −144−214 to −207 Synergistic reporter activation; mutation of response elements EMSA; transcripts induced by Jun overexpression in rat embryo fibroblasts.
  Human 92 NOTCH2 RBPJk GTGGGAA −79 to −73 Reporter activation in Hs683 cells and inactivation by mutation of response element, or mutation of NOTCH2.
  Human 83 GATA6   TTATCC −467 to −462 Reporter repression in human dermal fibroblasts (both basal and IL-4 or TGF-β induced); mutation of binding element; ChIP
  Human 62 NFKBIA (IkBα); IKBKB (IKK-β) NFkB GGGAATTCCT −214 to −207 Deletion of binding element inhibits promoter activation; EMSA; Overexpression of dominant negative regulators of NFkB inhibit strain-induced promoter activation in neonatal rat cardiac myocytes.
TNR Mouse 101       −167 to +435 167bp promoter was sufficient for full activity of reporter expression in cell lines of neural or glial origin but not in NIH3T3 and P19 teratocarcinoma cells.
  Human 99       −57 to +40 57bp promoter was sufficient for full activity of reporter expression in cell lines of neural or glial origin but not in SK-MEL28 and HeLa cells.
TNXB Mouse 124       −150 to +333 More active than longer or shorter constructs in mouse L and human 293Tcells
      SP1 GGGAGG −145 to −150 Mutation of binding element reduces reporter activity; EMSA and supershifts.
  Human 121       −181 to +88 Higher activity in HT1080 cells than longer or shorter constructs; TSS in HT1080 cells and fibroblasts at +46bp.
    SP1, SP3 SP1/3 GGG…GGG…GGG…GGG…CCC −33 to −76 Activation of 311bp and 181bp reporter constructs in Drosophila S9 cells. Mutation of binding sites inhibits promoter activity; EMSA and supershifts.