Table 2.
Acronyms and sequences of the reference, Ra(12), and oligomers with variable A-tracts and flanking sequences
| Acronym | Sequence |
|---|---|
| Ra(12) | CGCAGTGTACGACTAGACTACAGACG |
| A3(9) | CGCAAAGCGATCGACACTAGTACTCG |
| A3(13) | CGCAAAGTGTCTATACATATGTATCG |
| A2T2(8) | CGCAATTCTATATGCTCCGCAGACCG |
| A3T3(6) | CGCAAATTTCTATGCTCCGCAGACCG |
| A4T4(4) | CGCAAAATTTTCTGCTCCGCAGACCG |
| A5T5(2) | CGCAAAAATTTTTACTCGCCGCGCCG |
| A4in(4) | CGCAAAAGCGTCGAAAACCTCTCTCG |
| A4in(8) | CGCAAAAGTGTCTAAAATCTGTTCTG |
| A5in(2) | CGCAAAAAGCCGCAAAAACCTCGTCG |
| A5out(2) | CGCAAAAAGCCGCCTGAAAAACCTCG |
| A5=T5in(2) | GCCAAAAAGCTCGTTTTTCCGCACCG |
| A5=T5out(2) | CGCAAAAAGCTCGCCTTTTTGCACCG |
| A2T2in(4) | CGCAATTCGTCACAATTCTGCGACCG |
| A3T3in(0) | CGCAAATTTCGCCAAATTTCGCGCCG |
| A3T3in(4) | CGCAAATTTCGACAAATTTCTAGTCG |
| A3T3out(4) | CGCAAATTTCGAGTCAAATTTCTACG |
| A3T4in(2) | CGCAAATTTTCGCAAATTTTCAGACG |
| A4T2in(4) | CGCAAAATTCGTCAAAATTCTGTCTG |
| A4T3in(2) | CGCAAAATTTGTCAAAATTTCGCTCG |
| A4T4in(0) | CGCAAAATTTTCGAAAATTTTCGCCG |
| A4T4out(0) | CGCAAAATTTTCGCGCAAAATTTTCG |
| A4T4′in(0) | CGCCGCAAAATTTTCGAAAATTTTCG |
| ApT3in(0) | CAAATTCGGCAAATTTCGCAAATTCG |
All oligomers contained 46% or 62% A+T. The A-tracts are underlined for clarity.